ID FJ795775; SV 1; linear; genomic RNA; STD; VRL; 4223 BP. XX AC FJ795775; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate RUK74a polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4223 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4223 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 69f9916b82827ea8a5277bfaab931227. XX FH Key Location/Qualifiers FH FT source 1..4223 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea batatas" FT /isolate="RUK74a" FT /mol_type="genomic RNA" FT /country="Uganda:Rukungiri" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7L7" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7L7" FT /protein_id="ACY74507.1" FT /translation="GATSCVLHQTKDSLSKHLGLKGVWNKSVITQDLLILAGVFAGGIW FT MIMAGVKDSFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGAVIDDSPYTDILLVQERIGE FT ARLNAIKEDELSREKVAQNPGIHAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLNDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLVNEADG FT RTSDCFGIGYGGLIVTNRHLFKRNNGTLTIRSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDIPPFPQRLKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPVAPFKVSKLITDLEGIQVYAQTRSDRWVQDRLYGNLKAVGQ FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSRLNKEAYNKDLFKYATQ FT IQAGDVQVDTFELAERSVISMLTSKGFEKCNYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDVEDHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDIGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESEFEKCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKLEPERIVSILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGKAPYIAETALKALYTGVQPNA FT SELSAYTRVLKEMYDDSMLQENDLEVYHQSNERTEFKDAGADPPAPKPKNVPPPPTITE FT ITDPEDPKQEALKAARAKQPAIIPESYGRDTSKERESIVGASSKSVRDKDVNVGTVGTF FT VVPRVKVNANKKRQPMINGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVGDTEMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3055..3999 FT /product="coat protein; CP" XX SQ Sequence 4223 BP; 1369 A; 758 C; 976 G; 1120 T; 0 other; ggagccacct cttgtgtgct ccatcaaact aaggattctc tctcaaaaca tcttggtctg 60 aagggagtat ggaacaagtc agttattaca caggacctac ttattctcgc aggagttttt 120 gctggtggaa tctggatgat aatggcggga gtgaaggatt catttgatca aactgtgcta 180 catcaaggaa aagaaaagag gcaaatgcaa aagctaaaat tcagaaaggc acgcgataat 240 aaacttggat tcgaagtgca tgctgatgat ggaactatcg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gttactggaa tgggatcgaa gaatagaaaa 360 tttataaaca tgtacggatt tgatcccact gaatattcct ttgtccgatt tgttgaccca 420 ttgactggag ctgtgataga tgactcccca tacacagata ttcttcttgt tcaggagagg 480 attggtgagg ctcgtttgaa tgccatcaaa gaagatgaac tttcaagaga aaaagttgca 540 caaaatccag gaattcatgc atattatatc aatgaaatca caaatgccgc acttaaagtt 600 gatcttacac cgcacaatcc attacttgca tgtgaaagac atagcactat tgccggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac acttaatgac 720 gtgccagtga atcctgaaga ggcaagtttg gttgggcacg aaagtaaatc attgtttaga 780 ggcttaaggg attataatcc aatagctagc gtcatatgtc atctcgtgaa tgaggcagat 840 ggaagaacaa gtgactgttt cgggattgga tatggcggtc tcattgttac taataggcat 900 ctgtttaaac gaaacaatgg gacgttgaca ataagatctc gtcacggaga gtttgttatt 960 aagaatacaa ctcaacttgg aatgaaaccc tgtgctgata gagacatact aatcattagg 1020 atgcctaagg atataccccc gttcccacaa cgcctgaaat ttagggttcc aaaggaaaat 1080 gaaagaatct gcttggttgg atcaaatttt caggataaat caatcacgag cacaatttct 1140 gaaaccagcg taacatgcca tgtgccaaac tcacattttt ggaagcactg gattgataca 1200 aaagatggac attgtggtct tcctttagta agtactactg atggtgcttt gttgggagtg 1260 catagtttat caaatttgac gaatactcag aacttctttg catcatttcc tgagaacttt 1320 gaagtggact atttgaaaac tcctgaggca atggattgga taaagaaatg gagttataat 1380 ccagacgaaa tttgttgggg aacgctggag ctgaagacag gacaacccgt tgccccattc 1440 aaagtatcca aactaatcac ggacttagaa ggcatacaag tgtatgccca aacaaggtcg 1500 gatagatggg ttcaagatag actatatggc aatcttaaag cagttggtca atgtcctgca 1560 caattagtta ctaagcacgt tgtgaaggga aaatgcatgc tatttgacct atatttgcag 1620 caagatcaat ctgaaagaga gtatttcaag cctcttatgg gagcatatgg gaaaagtagg 1680 ctcaacaaag aggcgtataa taaggatttg ttcaaatatg cgacacaaat ccaggcagga 1740 gatgtgcaag tggatacatt cgaattggcg gaaagatctg tcatttctat gctcacgtca 1800 aaagggtttg aaaagtgcaa ctacataaca gatccagagg aaattctgaa agcactgaac 1860 atgaaggctg cagtcggtgc gatgtacagt ggaaagaaga aggattactt tgaaggaatg 1920 agtgatcacg atgtggaaga ccatcttttt catagttgca agcgtttgtt catgggacac 1980 aaaggtcttt ggaatggatc cttaaaagct gagttgagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaaccttcac agcggctcct cttgacacgc tgcttggtgg taaggtgtgt 2100 gtagacgatt tcaataacat gttttacaac caccatttaa aatgtccatg gacagtagga 2160 ataaccaaat tttaccaagg atgggatagg cttctcacat ctctacctga aggatgggtt 2220 tattgtgacg ctgatggctc acaatttgat agttctctct ctccatattt gatcaattca 2280 gttcttaata taagaagaga atttatggaa gattgggata ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt gtacacacca atactgacac cagacggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacagcca tctactgtgg ttgataatac acttatggtt 2460 gtgttggcag ttcactacac actgctgaaa ctaggaatcc aagagagcga gtttgaaaaa 2520 tgctgtgtct ttttcgcaaa tggtgatgat ttattattgg caatgaggcc agatacagcc 2580 catttactgg ataagtttgg tgaatgtttt tctgaattag gactcaatta tgacttttca 2640 tcacggacaa ataagaagga agatctatgg tttatgtcac actgtggcgt gaaacgtgat 2700 ggaatattta ttccgaagtt ggagcctgaa aggattgttt caattcttga atgggatcgt 2760 tcacacgagc caattcatcg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttctatgcat gggttttgga ccaagcccca 2880 tacaatgaac tagcacgaaa tgggaaagca ccatacatag ctgaaactgc actcaaagca 2940 ctctatactg gtgttcaacc taatgcctct gaattgagtg cgtatacgag agtgctcaaa 3000 gaaatgtatg atgacagtat gctccaagag aatgatttgg aagtatatca ccaatctaat 3060 gaaagaactg aatttaaaga tgcaggagcg gaccctccag cccctaagcc taagaacgtt 3120 cctccaccac ccacaataac tgaaatcact gatccagagg acccgaagca ggaagctttg 3180 aaagctgcac gagcaaagca acccgcgatc attccagagt catatggacg agacacgagc 3240 aaagaaaggg agtcaatagt gggagcatca tcaaagagtg tgagggataa agatgtgaat 3300 gttggcaccg ttggtacatt tgttgtgcca cgtgtcaagg tgaatgcaaa taagaagagg 3360 caaccaatga tcaatggaag ggccattata aattttcagc acttgtcaac atatgaacca 3420 gagcaatttg aggttgcaaa cacccggtca actcaagaac agttccaagc atggtatgaa 3480 ggagttaaag gggattatgg tgttggcgac acagagatgg gaatcttatt gaatggactg 3540 atggtttggt gcattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gatggtgatg aacaagtaac atatccaatt aaaccattac tggaccatgc agtgcctact 3660 tttaggcaaa tcatgacgca cttcagtgac gttgctgaag cttacataga gatgcgaaac 3720 cgtacaaagg cttacatgcc aaggtatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagttg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaagc agccgcactt aagaatgcgc gaaatcggtt gtttggttta 3900 gacggaaacg tctccacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatctt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tgaatgcata acatggtggg attatatctc ggttattgca tttgagaagt 4140 cacctttcta ttacgtatca taagggactc ttaaaagtga ggaatacctc gtaagaaaag 4200 cctttttggt tcgtgatcga gcc 4223 //