ID FJ795774; SV 1; linear; genomic RNA; STD; VRL; 4223 BP. XX AC FJ795774; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate MBL92a polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4223 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4223 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 8c4019c57beed4b889f587fc4af75354. XX FH Key Location/Qualifiers FH FT source 1..4223 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea batatas" FT /isolate="MBL92a" FT /mol_type="genomic RNA" FT /country="Uganda:Mbale" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7L6" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7L6" FT /protein_id="ACY74506.1" FT /translation="GATSCVLHQTKDSLSKHLGLKGVWNKSVITQDLLILAGVFAGGIW FT MIMAGVKDSFDQTVLHQGKEKRQMQKLRFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGTVMDDSPYTDILLVQERIGE FT ARLNAIKEDELSREKVAQNPGIHAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLNDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLVNEADG FT RTSDCFGIGYGGLIVTNRHLFKRNNGTLTIRSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDILPFPQRLKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWN FT YNPDEICWGTLELKTGQPVAPFKVSKLITDLEGIQVYAQTRSDRWVQDRLYGNLKAVGR FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSRLNKEAYNKDLFKYATQ FT IQAGDVQVDTFELAERSVISMLTSKGFEKCNYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHNVEDHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVQRDGIFIPKLEPERIVSILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGKAPYIAETALKALYTGVQPNA FT SELSVYTRMLKEMYDDSLLQENDLEVYHQSNERTEFKDAGVNPPAPKPKDVPPPPTITE FT ITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERESIVGASSKGVRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3055..3999 FT /product="coat protein; CP" XX SQ Sequence 4223 BP; 1367 A; 766 C; 979 G; 1111 T; 0 other; ggagccacct cttgtgtgct ccaccaaact aaggattctc tctcaaaaca tcttggtctg 60 aagggagtat ggaacaagtc agttattaca caggacttac ttattctcgc aggagttttt 120 gctggtggaa tctggatgat aatggcggga gtgaaggatt catttgatca aactgtgcta 180 catcaaggaa aagaaaagag gcaaatgcaa aagctgagat tcagaaaagc acgagataac 240 aaacttggat tcgaagtgca tgctgatgat ggaacaatcg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gttactggaa tgggatcgaa gaatagaaaa 360 tttataaaca tgtacggatt tgaccccact gaatattcct ttgtccgatt tgttgaccca 420 ttgactggaa ctgtgatgga tgattcccca tacacagata ttctccttgt gcaggagagg 480 attggcgagg ctcgtttgaa cgccatcaaa gaagatgaac tgtcaagaga aaaagttgca 540 caaaatccag gaattcatgc atactatatc aatgaaatca caaatgctgc acttaaagtt 600 gatcttacac cgcacaatcc attacttgca tgtgaaagac atagcactat tgccggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaaaatgac acttaatgac 720 gtgccagtga atcctgaaga ggcaagtttg gttgggcacg aaagtaaatc attatttaga 780 ggcttaaggg attataatcc aatagctagc gtcatatgtc atctcgtgaa tgaggcagat 840 ggaagaacaa gtgactgttt cgggattgga tatggcggtc tcattgtcac caataggcat 900 ctgtttaaac gaaacaatgg gacgttgaca ataagatctc gtcacggaga gtttgttatt 960 aagaacacaa ctcaacttgg aatgaaaccc tgtgctgata gagacatact aatcattagg 1020 atgcctaagg atatactccc gttcccacaa cgcctgaaat ttagggttcc aaaagaaaat 1080 gaaagaatct gcttggttgg atcaaatttt caggataaat caatcacgag cactatttct 1140 gaaaccagcg taacgtgcca tgtgccaaac tcacattttt ggaagcactg gattgataca 1200 aaagatggac attgtggtct tcccttagta agcactactg atggtgcttt gttgggagtg 1260 catagtctat caaatttgac gaacactcag aacttctttg catcatttcc tgagaacttt 1320 gaagtggatt atttgaaaac tcctgaggca atggattgga taaagaaatg gaattataat 1380 ccagatgaaa tttgttgggg gacgttggaa ctgaagacag gacaacccgt tgccccattc 1440 aaagtgtcaa aactaatcac ggacttagaa ggcatacaag tgtacgctca aacaaggtcg 1500 gatagatggg ttcaggatag actatatggc aatcttaaag cagttggtcg atgtcctgca 1560 caattggtta ctaagcacgt tgtgaaggga aaatgtatgc tatttgacct atatttgcag 1620 caagatcaat ctgaaaggga gtatttcaag cctcttatgg gagcgtacgg gaaaagtaga 1680 cttaacaaag aggcgtataa taaggatttg ttcaaatatg cgacacaaat tcaggcagga 1740 gatgtgcaag tggatacatt cgaattggca gaaagatctg tcatttctat gctcacgtca 1800 aaaggatttg aaaagtgtaa ctacatcaca gatccagaag aaattctgaa agcactgaac 1860 atgaaggccg cagtcggtgc gatgtacagt ggaaagaaga aagattactt tgaaggaatg 1920 agcgaccaca atgtggaaga ccatcttttt catagttgca agcgtttgtt catgggacac 1980 aaaggtcttt ggaatggatc cttgaaagct gagttgagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaacattcac agcggctcct cttgacacgc tacttggtgg taaggtgtgt 2100 gtagacgatt tcaataacat gttttacaac caccatttaa aatgtccatg gacggtagga 2160 ataaccaaat tctaccaagg atgggatagg cttctcacat ctctacctga aggatgggtt 2220 tattgtgacg ctgacggctc acaatttgat agctctctct ctccatattt gatcaattca 2280 gttcttaata taagaagaga atttatggaa gattgggatg ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt atacacacca atactaacac cagacggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacagcca tctactgtgg ttgataatac acttatggtt 2460 gtgttagcag ttcactacac attgctgaaa ctaggaatcc aagaaagcga gtttgataaa 2520 tgctgtgtct ttttcgcaaa tggtgatgat ttattgttgg caatgaggcc agatacagcc 2580 catttactgg ataagtttgg cgaatgtttt tctgaattag gacttaatta tgacttttca 2640 tcacgaacaa ataagaagga ggatctatgg tttatgtcac actgtggtgt gcaacgtgat 2700 ggaatattta ttccgaagtt ggagcctgaa aggattgttt caattcttga atgggatcgt 2760 tcacacgagc caattcatcg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttttatgcat gggttttaga ccaagcccca 2880 tacaacgaac tagcacgaaa tgggaaggca ccatacatag ctgaaactgc actcaaagca 2940 ctctatactg gtgttcaacc taatgcctct gaattgagtg tgtatacgag aatgctcaaa 3000 gaaatgtatg atgacagtct actccaagag aatgatttgg aagtatatca tcaatctaat 3060 gagagaactg aatttaaaga tgcaggagtg aaccctccag cccctaagcc taaggacgtt 3120 cctccaccac ccacaataac tgaaatcact gatccagagg acccgaagca ggcagctttg 3180 aaagctgcac gagcaaagca acccgcggtc attccagagt catatggacg agacacgagc 3240 aaagaaaggg agtcaatagt gggagcatca tcaaagggtg tgagggataa agatgtgaat 3300 gttggcaccg ttggtacatt tgttgtgcca cgtgtcaaga tgaatgcaaa taagaaaagg 3360 caaccaatgg tcaatggaag ggccattata aatttccagc acttgtcaac atatgaacca 3420 gagcagtttg aggttgcaaa cacccggtca actcaagaac agttccaagc atggtatgaa 3480 ggagttaaag gggattatgg tgttgacgac acagggatgg ggatcttact gaatggacta 3540 atggtttggt gcattgaaaa tggcacatcc ccaaacataa atggtgtgtg gacaatgatg 3600 gatggtgatg aacaagtaac atatccaatt aaaccattac tggaccatgc agtgcctact 3660 tttaggcaga ttatgacgca cttcagtgac gttgctgaag cttacataga gatgcgaaac 3720 cgtacaaagg catacatgcc aaggtatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagctg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agccgcactt aagaatgcgc gaaatcggtt gtttggttta 3900 gacggaaacg tctctacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatctt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tgaatgcata acatggtggg attatatctc ggttattgca tttgagaagt 4140 cacctttcta ttacgtatca taagggactc ttaaaagtga ggagtacctc gtaagaaaag 4200 cctttttggt tcgtgatcga gcc 4223 //