ID FJ795767; SV 1; linear; genomic RNA; STD; VRL; 4223 BP. XX AC FJ795767; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate BUSH86 polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4223 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4223 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 467428bbfbf86dd6f51fc9d6138a7e42. XX FH Key Location/Qualifiers FH FT source 1..4223 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea tenuirostris" FT /isolate="BUSH86" FT /mol_type="genomic RNA" FT /country="Uganda:Bushenyi" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7K9" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7K9" FT /protein_id="ACY74499.1" FT /translation="GATSCVLHQTKDALSKHLRLKGVWNKSVITQDLFILAGVFAGGLW FT MIMAGLKESFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGAVIDDSPYTDILLVQEKIGE FT ARLNAIKEDEISREKVAQNPGIHAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLKDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLMNEADG FT RTSDCFGIGYGGLIITNRHLFKRNNGTLTIKSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDIPPFPQRIKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPVAPFKVSKLITDLEGIQVYAQTRSDKWVQDRLYGNLKAVGQ FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSKLNKEAYNKDLFKYATQ FT IQAGDVQVDTFESAERSVVSMLTSKGFEKCNYITDSEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDAEDHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKLEPERIVSILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGKAPYIAETALKALYTGVQPNA FT SELSAYTRVLKEMYDDSMLQENDLEVYHQSKENTEFKDAGANPPAPKPKDIPPPPTITE FT ITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERESIVGTSSKGVRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3055..3999 FT /product="coat protein; CP" XX SQ Sequence 4223 BP; 1376 A; 773 C; 977 G; 1097 T; 0 other; ggggccacct cttgtgtgct tcatcaaaca aaagatgcac tctcaaagca ccttcgtttg 60 aaaggagtgt ggaataaatc agtcatcaca caggatttgt tcattttagc aggggtattt 120 gctggtggtt tgtggatgat aatggcgggg ctaaaggaat cattcgatca aactgtgcta 180 caccaaggaa aagaaaagcg acaaatgcaa aaactgaagt ttaggaaagc gcgagataat 240 aaactcggat tcgaagtaca cgccgatgat ggaactattg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gtcactggaa tgggatcaaa gaacagaaaa 360 tttataaaca tgtacggatt cgatcccact gagtattcct ttgtccgatt tgttgacccg 420 ttaactggag ctgtgataga tgattcccca tacacagata ttcttcttgt tcaggagaag 480 attggtgagg ctcgattgaa tgccatcaaa gaggatgaaa tttcaagaga gaaagttgca 540 caaaatccag gaattcatgc atactatatc aatgaaatca caaatgctgc actcaaagtt 600 gatcttacac cgcacaatcc actacttgca tgtgaaagac atagcaccat tgctggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac acttaaagac 720 gtgccagtga atcctgaaga ggcaagttta gttgggcatg agagtaaatc actattcaga 780 ggcctaaggg attacaaccc aatagcaagt gttatatgtc acctaatgaa tgaagcggat 840 gggagaacaa gcgactgctt tggaatcgga tacggtggtc tcattataac aaataggcat 900 cttttcaaaa ggaacaatgg cacattaaca attaaatctc gacacggaga atttgttatc 960 aagaacacaa cccaacttgg gatgaaacct tgcgctgaca gagacatact catcattagg 1020 atgcctaagg atatacctcc gtttccacaa cgaatcaaat ttagggttcc aaaggagaac 1080 gaaagaattt gcttggttgg gtcaaatttt caagacaaat caattacaag cacgatctct 1140 gaaactagtg taacgtgcca tgtgccaaac tcgcattttt ggaagcactg gatcgataca 1200 aaagatggac attgtggtct tcccttagta agcactactg atggtgcttt gttgggagtg 1260 catagtctat caaatttgac gaacactcag aacttctttg catcatttcc tgagaacttt 1320 gaagtggact atttgaaaac tcctgaggca atggattgga taaagaaatg gagttataat 1380 ccagatgaaa tttgttgggg gacactggaa ctgaagacag ggcaacccgt tgccccattc 1440 aaagtgtcca aactaatcac ggacttagaa ggcatacaag tgtatgctca aacaaggtca 1500 gacaaatggg ttcaagatag actatatggc aatcttaaag cagttggtca atgtcctgca 1560 caattggtta ccaagcacgt tgtgaaggga aaatgcatgc tatttgacct atatttgcag 1620 caagatcaat ctgaaaggga gtatttcaag cctcttatgg gagcatacgg gaaaagtaag 1680 ctcaacaaag aggcgtataa taaggacttg tttaagtatg cgacacaaat tcaggcagga 1740 gatgtgcaag tggatacgtt cgaatcggcg gaaagatctg tcgtttccat gctcacgtca 1800 aaaggatttg aaaagtgcaa ctacatcaca gattcagagg aaattctgaa agcactgaat 1860 atgaaggctg cagtaggtgc gatgtacagt ggaaagaaga aggattactt tgaaggaatg 1920 agcgatcacg atgcagaaga ccatcttttt cacagttgca agcgtttgtt catgggacac 1980 aaaggtcttt ggaatggatc cttgaaagct gagttgaggc ctatggaaaa agtggaactt 2040 aacaaaacaa gaactttcac agcggctcct cttgacacgc tacttggtgg taaggtgtgt 2100 gtagacgatt tcaataacat gttttacaac caccatttaa aatgtccatg gacggtagga 2160 ataaccaaat tctaccaagg atgggatagg cttcttacat ctctacctga gggatgggtt 2220 tattgtgatg ctgatggctc acaatttgat agttctctct ctccatattt gattaattca 2280 gttcttaata taagaagaga atttatggaa gattgggatg ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt gtacacacca atactgacac cagatggaac catagtgaag 2400 aagttcaaag gtaacaatag tggacagcca tccactgtgg tcgataatac acttatggtt 2460 gtgttagcag ttcactacac actgctgaaa ttaggaatcc aagaaagcga gtttgataaa 2520 tgctgtgtct ttttcgcaaa tggtgacgat ttattgttgg caatgaggcc agatacagcc 2580 catttactgg ataagtttgg tgaatgtttt tctgaattag gacttaatta tgacttttca 2640 tcacgaacaa acaagaaaga agatctatgg tttatgtcac actgtggcgt gaaacgtgat 2700 ggaatattta ttccgaagtt ggaacctgaa aggattgttt caattcttga atgggatcgt 2760 tcacacgagc caattcatcg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttctatgcat gggttttgga ccaagcccca 2880 tacaatgaac tagcacgaaa tgggaaagca ccatacatag ctgaaactgc actcaaagca 2940 ctctatactg gtgttcaacc taatgcttct gaattgagtg cgtatacaag agtgctcaaa 3000 gaaatgtatg atgatagtat gcttcaagag aatgatttgg aagtatatca tcaatctaaa 3060 gagaacactg aatttaaaga tgcaggagcg aaccctccag cccctaagcc taaggacatt 3120 cctccaccac ccacaataac tgaaatcact gatccagagg acccgaagca ggcagctttg 3180 aaagctgcac gagcaaagca acccgcagtc attccagaat catatggacg agacacgagc 3240 aaagaaaggg agtcaatagt ggggacatca tcaaagggtg tgagggataa agatgtgaat 3300 gttggcaccg ttggtacatt tgttgtgcca cgtgtcaaaa tgaatgcaaa caagaaaagg 3360 caaccaatgg tcaatggaag ggccattata aatttccagc acttgtcaac atatgaacca 3420 gagcagtttg aggttgcaaa cacccgatcg actcaagaac agttccaagc atggtatgaa 3480 ggagttaaag gggattatgg tgttgacgac acaggaatgg ggatcttgtt gaatggacta 3540 atggtttggt gcattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gacggtgatg agcaagtgac atacccaatt aaaccattat tggatcatgc agtgcctact 3660 tttaggcaga ttatgacgca cttcagtgac gttgctgaag cctatataga aatgcgaaac 3720 cgtacaaagg cgtacatgcc aagatatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagctg cattcaacca cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agccgcactt aagaatgcgc gaaatcggtt gtttggtttg 3900 gacggaaacg tctccacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatctt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tgaatgcata acatggtggg attatatctc ggttattgca tttgagaagt 4140 cacctttcta ttacgtatca taagggactc ttaaaagtga ggagtacctc gtaagaaaag 4200 cctttttggt tcgtgatcga gcc 4223 //