ID FJ795763; SV 1; linear; genomic RNA; STD; VRL; 4222 BP. XX AC FJ795763; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate KNG59a polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4222 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4222 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 9582b45e45e312b19993626bd5ae9572. XX FH Key Location/Qualifiers FH FT source 1..4222 FT /organism="Sweet potato feathery mottle virus" FT /host="Lepistemon owariensis" FT /isolate="KNG59a" FT /mol_type="genomic RNA" FT /country="Uganda:Kanungu" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7K5" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7K5" FT /protein_id="ACY74495.1" FT /translation="GATSCVLHQTKDALSKHLRLKGVWNKSVITQDLFILAGVFAGGLW FT MIMAGLKESFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGSVIDDSPYTDILLVQERIGE FT ARLNAIKEDELSREKVAQNPGIHAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLNDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLMNEADG FT RTSDCFGIGYGGLIITNRHLFKRNNGTLTIKSRHGEFVIKNTPQLGMKPCADRDILIIR FT MPKDIPPFPQRLKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPVAPFKVSKLITDLEGIQVYAQTRSDRWVQDRLHGNLKAVGR FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEKEYFKPLMGAYGKSKLNKEAYNKDLFKYATQ FT IHAGDVQVDTFELAERSVISMLTSKGFEKCNYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDVENHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESELDNCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTSKKEDLWFMSHCGVKRDGIFIPKLEPERIVSILEWDRSHEPVHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGQAPYIAETALKALYTGVQPNA FT SELSAYTRVLQEMYDDSMLQENDMEVYHQSNEKTEFKDAGANPPAPKPKDIPPPPTITE FT ITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERESIVGTSSKGVRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3055..3999 FT /product="coat protein; CP" FT 3'UTR 4003..4222 XX SQ Sequence 4222 BP; 1359 A; 772 C; 983 G; 1108 T; 0 other; ggagccacct cttgtgtgct tcatcaaaca aaagatgcac tctcaaagca ccttcgtttg 60 aaaggagtgt ggaataaatc agtcatcaca caggatttgt tcattttagc aggggtattt 120 gctggtggtt tgtggatgat aatggcgggg ttaaaagaat catttgatca aactgtgcta 180 caccaaggaa aagaaaagcg acaaatgcaa aagctgaagt ttaggaaagc gcgagataat 240 aagcttggat tcgaagtgca cgctgatgat ggaactatcg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaaa gttactggaa tgggatcaaa gaacagaaaa 360 tttataaaca tgtacggatt tgatcccact gaatattcct ttgtccgatt tgttgacccg 420 ttaactggat ctgtgataga tgattcccca tacacagata ttcttcttgt tcaggagagg 480 attggtgagg ctcgtttgaa tgccatcaaa gaagatgaac tttcaagaga gaaagttgca 540 caaaatccag gaattcatgc atactatatc aatgaaatca caaatgctgc gctcaaagtt 600 gatcttacac cgcacaatcc actacttgca tgtgaaagac atagcaccat tgccggtcac 660 cctgagtatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac acttaatgac 720 gtgccagtga atcctgaaga ggcaagttta gttgggcatg agagtaagtc gctattcaga 780 ggcttaaggg attacaaccc aatagcaagt gttatatgtc acctaatgaa tgaagcggat 840 gggagaacaa gtgattgctt tggaatcgga tacggtggtc tcattataac aaataggcat 900 cttttcaaaa ggaacaatgg cacattaaca attaaatctc gacatggaga atttgttatc 960 aagaacacac cccaacttgg gatgaaacct tgtgctgaca gagacatact catcattagg 1020 atgcctaagg atatacctcc gtttccacaa cgcctgaaat ttagggttcc aaaagaaaat 1080 gaaagaatct gcttggttgg atcaaatttt caggataaat caatcacgag cacgatttct 1140 gaaaccagcg tgacgtgcca tgtgccaaac tcgcattttt ggaagcactg gatcgataca 1200 aaagatggac attgtggtct tcccttagta agcactactg atggtgcttt gttgggagtg 1260 catagcctat caaatttgac gaacactcag aacttctttg catcatttcc tgagaacttt 1320 gaagtggact atttgaaaac tcctgaggca atggattgga taaagaagtg gagttataat 1380 ccagatgaaa tttgttgggg aacgctggaa ctgaaaacag gacaacccgt tgccccattc 1440 aaagtgtcca aactaattac ggacttagaa ggcatacaag tgtatgctca aacaaggtca 1500 gatagatggg ttcaagatag actacatggc aatcttaagg cagttggtcg atgtcctgca 1560 caattggtta ctaagcacgt tgtgaaagga aaatgcatgc tatttgacct atatttgcag 1620 caagatcaat ctgaaaagga gtatttcaag cctcttatgg gagcatacgg gaaaagtaag 1680 ctcaacaaag aggcgtataa taaggatttg tttaagtatg cgacacaaat tcacgcagga 1740 gatgtgcaag tggatacgtt cgaattggcg gaaagatctg tcatttccat gctcacatca 1800 aaaggatttg aaaagtgcaa ctacattaca gatccagagg aaattctgaa agcactgaat 1860 atgaaggctg cagttggtgc gatgtacagt ggaaagaaga aggattactt tgaaggaatg 1920 agtgatcacg atgtagaaaa ccatcttttt cacagttgca agcgtttgtt catgggacat 1980 aaaggtcttt ggaatggatc cttgaaagct gagttgagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaaccttcac agcagctcct cttgacacgt tacttggtgg taaggtgtgt 2100 gtagacgatt tcaacaacat gttttacaac caccatttaa aatgcccatg gacggtagga 2160 ataaccaaat tctaccaagg atgggatagg cttctcacat ctctacctga ggggtgggtt 2220 tattgtgatg ctgatggctc acaatttgat agttctctct ctccatattt gattaattca 2280 gttcttaata taagaagaga atttatggag gattgggatg ttggtgatca aatgcttcgg 2340 aatctataca cagaaatagt gtacacacca atactgacac cagatggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacagcca tccactgtgg ttgataatac acttatggtt 2460 gtgttagcag ttcactacac actgctgaaa ctaggaatcc aagaaagcga gcttgataat 2520 tgctgtgtct ttttcgcaaa tggtgatgat ttattgttgg caatgaggcc agatacagcc 2580 catttactgg ataagtttgg tgaatgtttt tctgaattag gactcaatta tgacttttca 2640 tcacgaacaa gtaagaaaga agatctatgg tttatgtcac actgtggcgt gaaacgtgat 2700 ggaatattta ttccgaagtt ggagcctgaa aggattgttt caattcttga atgggatcgt 2760 tcacacgagc cagttcatcg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttctacgcat gggttttgga ccaagcccca 2880 tacaatgaac tagcacgaaa tgggcaagca ccatacatag ctgaaactgc actcaaagca 2940 ctctatactg gtgttcaacc taatgcttct gaattgagtg cgtatacgag agtgctccaa 3000 gaaatgtatg atgacagtat gctccaagag aatgatatgg aagtatatca tcaatctaat 3060 gagaaaactg aatttaaaga tgcaggcgca aaccctccag ctcctaagcc caaggacatt 3120 cctccaccac ccacaataac tgaaattact gatccagagg acccgaagca ggcagctttg 3180 aaagctgcac gagcaaagca acccgcagtc attccagaat catatggacg agacacgagc 3240 aaagaaaggg agtcaatagt ggggacatca tcaaagggtg tgagggataa agatgtgaat 3300 gttggcaccg ttggtacatt tgttgtgcca cgtgtcaaga tgaatgcaaa caagaaaagg 3360 caaccaatgg tcaatggaag ggccattata aatttccagc acttgtcaac gtatgaacca 3420 gagcagtttg aggttgcaaa cacccggtcg actcaagaac agttccaagc atggtatgaa 3480 ggggttaaag gggattatgg tgttgacgac acaggaatgg ggatcttatt gaatggacta 3540 atggtttggt gcattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gatggtgatg agcaagtgac atatccaatt aaaccattac tggaccatgc agtgcctact 3660 tttaggcaga ttatgacgca cttcagtgac gttgctgaag cttacataga gatgcgaaac 3720 cgtacaaagg cgtacatgcc aagatatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagctg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agccgcactt aagaatgcgc gaaatcggtt gtttggtttg 3900 gacggaaacg tctccacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatttt agtatgcctt taatttaaat tcgtgtcttt cagtcccgaa 4080 ggagatggtt gaatgcataa catggtggga ttatatctcg gttattgcat tcgagaagtc 4140 acctttctat tacgtatcat aagggactct taaaagtgag gagtacctcg taagaaaagc 4200 ctttttggtt cgtgatcgag cc 4222 //