ID FJ795757; SV 1; linear; genomic RNA; STD; VRL; 4332 BP. XX AC FJ795757; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate RKI77b polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4332 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4332 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 3c5917327fde102b5e622a1b4c95c10c. XX FH Key Location/Qualifiers FH FT source 1..4332 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea cairica" FT /isolate="RKI77b" FT /mol_type="genomic RNA" FT /country="Uganda:Rakai" FT /db_xref="taxon:12844" FT CDS <1..4110 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7J9" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="UniProtKB/TrEMBL:E1U7J9" FT /protein_id="ACY74489.1" FT /translation="IAVLSSARAQLLEFENLSMDASYNEMSKGILETYVRENGATTCVL FT HQTKSDLAKHLQLKGIWNKSVITQDLLVLAGVFVGGIWMVFSGAKESFEQTVKHQGKEK FT RQRQKLKFRQARDRKLGFEVHADDGTIEHYFGSAYTAKGKQKGKVTGMGAKNRKFINMY FT GFDPTEYSFVRFVDPLTGLVFDDSPYTDIQLVQEKIGDARHKAILEDKLSRERISYNPG FT ISAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPDHEGELRQTGSVVKIDIRDVPE FT NPEEASLVGHESKSLFRGLRDYNPIASVICHLVNEADGRTSDSYGIGYGGLIITNRHLF FT KRNNGTLTIRSRHGEFVIKNTTQLGMKPCADRDILIIKMPKDIPPFPQRLQFRVPKENE FT RICLVGSNFQDKSITSTVSETSVTCHVPNSHFWKHWIDTKDGHCGLPLVSTVDGAILGV FT HSLSNLTNTQNFFAAVPANFEIDYLKTPEATEWIKKWSYNPSEICWGTLELKTGQPVAP FT FKVTKLITDLDSMQVYAQARSDRWVLDRLYGNLKAVGQCPAQLVTKHVVKGKCMLFDLY FT LQQDCDVRNFFKPLMGAYGKSRLNKEAYNKDLFKYATPINAGDVCHKTFEQAELAVVDM FT LKANGFHKCNYITDPDEIFKALNMKAAVGAMYSGKKKDYFDGMSDEDIENLLFHSCKRL FT YMGQKGLWNGSLKAELRPMAKVELNKTRTFTAAPLDTLLGGKTCVDDFNNMFYNNHLKC FT PWTVGITKFYQGWDRLLTSLPEDWIYCDADGSQFDSSLSPYLINAVLNIRREFMEEWDI FT GDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVVLAVYYTLLKLGV FT PELDISERCVFFANGDDLLIAMRPDTAHLLDSFGECFAELGLNYDFSSRTTKREELWFM FT SHCGIKRDGIYIPKLEPERIVSILEWDRSHEPIHRLEAICAAMVEAWGYDELLHQIRRF FT YAWVLGQAPYSELARTGKAPYIAETALKSLYTGVQPSADDLSEYTRVLNEMYDDSLLQD FT NDLAVYHQSGNPPEFKDAGANPLDPKPKGPYTAPEITEITEPEDPKQAALREARQKQPA FT VTPESYGRDTGEKPMRSVSPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRVNGVSVV FT NLQHLATYEPEQHNIGNTRSTQEQFQAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGT FT SPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPR FT YGLQRNLTDMSLARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLDGNVSTQ FT EEDTERHTATDVTRNIHNLLGMRGVH" FT mat_peptide <1..141 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 142..300 FT /product="6K2 protein" FT mat_peptide 301..876 FT /product="VPg protein" FT mat_peptide 877..1605 FT /product="NIa-Pro protein" FT mat_peptide 1606..3168 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3169..4107 FT /product="coat protein; CP" FT 3'UTR 4111..4332 XX SQ Sequence 4332 BP; 1370 A; 823 C; 1015 G; 1124 T; 0 other; atagctgtac tatcatcagc tagagcacaa ctcctcgaat ttgaaaattt gagtatggat 60 gcctcatata acgaaatgag caaaggaatt cttgaaacgt acgtgcgtga gaacggtgcc 120 accacttgtg tattacacca aacaaaaagt gatctcgcga agcatctaca gcttaagggc 180 atttggaata aatccgtgat aacacaagat ctcctggtac tagcaggagt ttttgttggt 240 ggtatttgga tggtgttttc gggtgcaaag gaatcttttg agcagacagt taaacaccag 300 ggaaaagaga aaagacaaag gcaaaagttg aagttccggc aggctcgtga taggaaacta 360 ggatttgaag tccacgcaga tgatggcaca attgagcatt actttggaag tgcatacact 420 gcgaaaggaa aacagaaagg aaaggtcacg ggtatggggg cgaagaatag gaagtttata 480 aatatgtatg gcttcgatcc gactgagtac tcttttgtga gatttgtgga cccgttgaca 540 ggattggtgt ttgatgactc accatacaca gatattcaac tggttcaaga aaagattggt 600 gatgcgaggc ataaggcaat acttgaagat aagctctccc gcgagaggat atcatataat 660 cctgggatta gtgcatatta tatcaacgag attacaaatg cagcattgaa ggtagatctc 720 acaccacaca acccattact cgcatgtgag agacatagca caatagctgg acatccagat 780 catgagggtg agttacggca gactggctcc gttgttaaga ttgatattag agatgtgccg 840 gagaacccag aagaagcatc gcttgtggga catgagagca aatccctttt caggggtttg 900 agggactaca atccaattgc aagtgtaata tgtcatttag taaatgaagc agatggtaga 960 acaagtgatt catatggcat tggatatggc ggtctaatca tcacgaatag acatctattc 1020 aagcgtaata atgggactct cacaatacgc tcgcgacatg gggaattcgt gattaagaac 1080 actactcaat tgggtatgaa accatgtgct gaccgtgaca tattgataat aaagatgccc 1140 aaagacatcc caccttttcc acagagactt cagtttaggg ttcccaagga gaatgagcgc 1200 atttgtctag taggttcaaa cttccaagac aaatctatca caagcactgt ctctgaaacg 1260 agtgttacat gtcatgtacc aaactcacat ttttggaagc attggataga cacaaaagat 1320 ggacattgtg gcttacctct tgtaagcaca gttgatggtg caattctggg ggttcatagc 1380 ttgtcaaatc tcacaaacac ccaaaacttc tttgcagctg ttcctgcaaa ctttgagatt 1440 gattacttaa aaacgcccga ggcgactgaa tggattaaga aatggagtta taacccaagt 1500 gaaatctgtt gggggacttt ggaactcaag acaggacaac cagttgcgcc ttttaaagtc 1560 accaagttga taacagatct agatagtatg caagtatacg ctcaagcacg ctcggacaga 1620 tgggtgctag ataggttata tggaaatttg aaagctgtgg gacaatgtcc agcacagctt 1680 gttacaaaac acgttgtgaa gggaaaatgt atgctttttg atttgtatct tcaacaagat 1740 tgtgatgtta gaaacttttt caagccttta atgggagcat atgggaaaag tagattgaac 1800 aaagaagcat acaacaagga tttgttcaag tatgcaactc caatcaatgc aggagatgtg 1860 tgtcacaaaa catttgagca ggcagagtta gccgttgttg acatgctcaa agcaaatggt 1920 tttcataagt gtaactacat cacagacccg gatgaaatct tcaaagcact caacatgaag 1980 gcagctgttg gagcaatgta cagtggaaag aagaaagact attttgatgg tatgagtgat 2040 gaggatatcg aaaatcttct ttttcacagc tgtaaacgat tgtacatggg gcaaaaagga 2100 ctttggaatg gctccttaaa ggctgagctc aggcccatgg caaaagttga attgaataaa 2160 acaaggactt ttacggcggc cccacttgac acacttttgg gtggtaaaac atgtgttgat 2220 gattttaaca acatgtttta caacaaccat ctcaaatgcc catggacagt aggtatcaca 2280 aaattctacc aaggatggga tagattgtta acatctttac ctgaagattg gatttattgt 2340 gatgcggatg gttctcaatt tgacagttct ctatcaccct atcttattaa tgctgtcctc 2400 aacatacgga gggaatttat ggaagagtgg gacatagggg accaaatgct ccgaaatttg 2460 tacacagaga ttgtatacac gccaattcta acaccagatg gaaccatagt gaagaaattc 2520 aaaggaaaca atagtgggca accctcaacc gtcgtggaca atacactgat ggttgtgttg 2580 gctgtctact acactttgtt gaaattgggc gtcccagagc tcgacatcag tgaacggtgc 2640 gtattctttg caaatgggga tgacctacta atagctatga gaccagatac agctcatctt 2700 ttagatagct tcggtgagtg cttcgctgag cttgggctta actatgactt ctcatcaagg 2760 acaactaaga gagaggaact gtggttcatg tctcattgtg gaatcaaacg agatgggata 2820 tacattccca agctcgagcc tgaacgaata gtatctattc ttgaatggga tagatcacat 2880 gagcctatac acaggcttga agcaatttgt gctgcaatgg tggaagcgtg gggctatgac 2940 gaacttctcc accaaattag aagattttat gcatgggttt taggacaagc accatacagc 3000 gaactagcac gaactggaaa ggctccatat attgctgaaa ctgcacttaa atcactatat 3060 actggagtac aacctagcgc tgacgatctc agcgaataca cacgtgttct taacgagatg 3120 tatgatgata gccttctcca agacaatgat ctagcggtgt atcatcaatc tggtaacccc 3180 cctgaattta aagacgcagg tgcgaaccca ctagatccaa aaccaaaagg accatataca 3240 gcaccagaga tcacagaaat tactgagccg gaggatccca aacaagctgc acttcgtgag 3300 gctagacaga aacaacctgc tgtcacacct gaatcatatg gtagagatac aggtgagaaa 3360 cctatgcgct ctgtttcacc acaaagggtg aaagacaagg atgtcaacgt tggcacgaca 3420 ggtacatttt tagtgccacg agttaagctc catactagca aaatgcgtca acctagagtc 3480 aatggagtct ctgtagtaaa cttacaacac ctcgcaacct acgaacctga gcaacacaac 3540 attgggaata cacgctcaac tcaggaacaa tttcaagcat ggtatgaagg tgtcaagggt 3600 gattatggtg ttgatgacgc tggaatggca atcttgttga atggattgat ggtatggtgc 3660 atagagaatg gaacatctcc aaatataaat ggcgtttgga cgatgatgga tggggatgaa 3720 caagtgactt accccataaa gccattactg gatcatgcag tgcctacttt taggcaaatc 3780 atgacacact tcagtgacgt tgctgaagcg tatatagaaa tgaggaatcg caccaaggca 3840 tatatgccta ggtatggatt acaacgtaac ttgactgata tgagtcttgc gcgatatgca 3900 tttgatttct atgagctgca ctcaacaaca cctacacgtg ctaaagaagc acatatgcag 3960 atgaaagcag ctgcacttaa gaatgcgcat aatcggttgt ttggtttgga tggaaacgtc 4020 tccacgcaag aagaggacac ggagaggcac actgcgactg atgttactag aaatatacat 4080 aacctcttag gaatgagggg tgtgcactag gtgaaacttt gcactgtatt tatttactta 4140 tgtggttttt agtatgcctt tatttaaatt cgtgttcttc agtcccgaca gaaatggttg 4200 ggtgtatcga cagagtgggc ttctagcctg gtccatacac ttgagaagtt tctggtctat 4260 tacgtatcat aagggactct taaaagtgag gagtacctcg taagaaaagc ctttttggtt 4320 cgtgatcgag cc 4332 //