ID FJ795755; SV 1; linear; genomic RNA; STD; VRL; 4332 BP. XX AC FJ795755; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate 43RUKb polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4332 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4332 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; d7fc1ed69670c649bb0c1d6fb67884be. XX FH Key Location/Qualifiers FH FT source 1..4332 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea tenuirostris" FT /isolate="43RUKb" FT /mol_type="genomic RNA" FT /country="Uganda:Rukungiri" FT /db_xref="taxon:12844" FT CDS <1..4110 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7J7" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7J7" FT /protein_id="ACY74487.1" FT /translation="IAVLSSARAQLLEFDNLSMDASYNEMSKGILETYVRENGATSCVL FT HQTKSDLAKHLQLKGIWNKSVITQDLLVLAGVFVGGIWMVFSGAKESFEQTVKHQGKEK FT RQRQKLKFRQARDRKLGFEVHADDGTIEHYFGSAYTAKGKQKGKVTGMGAKNRKFINMY FT GFDPTEYSFVRFVDPLTGLVFDDSPYTDIQLVQEKIGDARHKAILEDKLSRERISHNPG FT VSAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPDHEGELRQTGSVVKIDIRDVPE FT NPEEASLVGHESKSLFRGLRDYNPIASVICHLVNEADGRTSDSYGIGYGGLIITNRHLF FT KRNNGTLTIRSRHGEFVIKNTTQLGMKPCADRDILIIKMPKDIPPFPQRLQFRVPKENE FT RICLVGSNFQDKSITSTVSETSVTCHVPNSHFWKHWIDTKDGHCGLPLVSTVDGAILGV FT HSLSNLTNTQNFFAAVPANFEIDYLKTSEATEWIKKWSYNPNEICWGTLELKTGQPVAP FT FKVIKLITDLDSMQVYAQARSDKWVLDRLYGNLKAVGQCPAQLVTKHVVKGKCMLFDLY FT LQQDHDVRSFFKPLMGAYGKSRLNKEAYNKDLFKYATPINAGDVCHKTFEQAELTVVEM FT LKANGFHKCNYITDPEEIVKALNMKAAVGAMYSGKKKDYFDGMSDEDIENLLFHSCKRL FT YMGQKGLWNGSLKAELRTMAKVELNKTRTFTAAPLDTLLGGKTCVDDFNNMFYNNHLKC FT PWTVGITKFYQGWDRLLTSLPENWIYCDADGSQFDSSLSPYLINAVLNIRREFMEEWDI FT GDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVVLAVYYTLLKLGV FT SEFEISERCVFFANGDDLLLAMRPDTANLLDSFGECFAELGLNYDFSSRTTKKEELWFM FT SHCGIKRDGIYIPKLEPERIVSILEWDRSHEPVHRLEAICAAMVEAWGYDELLHQIRKF FT YAWVLGQAPYSELARTGKAPYIAETALKSLYTGVQPIADDLSEYTRVLNEMYDDSLLQD FT NDLSVYHQSGNPPEFKDAGANPPAPKPKGAYTAPEITEVIEPEDPQQAALREARQKQPA FT VVPESYGRDTGERPMRSVSPQRVKDKDVNVGTTGTFVVPRVKLHTSKMRQPRVNGLSVV FT NLQHLATYEPEQHNIGNTRSTQEQFRAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGT FT SPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPR FT YGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHMQMKAAALKNAHNRLFGLDGNVSTQ FT EEDTERHTATDVTRNIHNLLGMRGVQ" FT mat_peptide <1..141 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 142..300 FT /product="6K2 protein" FT mat_peptide 301..876 FT /product="VPg protein" FT mat_peptide 877..1605 FT /product="NIa-Pro protein" FT mat_peptide 1606..3168 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3169..4107 FT /product="coat protein; CP" XX SQ Sequence 4332 BP; 1354 A; 813 C; 1037 G; 1128 T; 0 other; atagctgtac tatcatcagc tagagcgcaa ctcctcgaat ttgacaattt gagtatggat 60 gcctcatata acgaaatgag caaaggaatc cttgaaacgt atgtgcgtga gaacggagcc 120 acctcttgtg tgttacacca aacaaaaagt gatcttgcga agcatctaca gcttaagggc 180 atttggaata aatccgtgat aacacaagac ctcctggtgc tagcaggagt ttttgttggt 240 ggtatatgga tggtgttttc gggtgcaaag gaatctttcg agcagacagt taaacaccaa 300 ggaaaagaga aaagacaaag gcaaaagttg aagttccggc aggctcgtga taggaaacta 360 ggatttgaag ttcacgcaga tgatggcaca atcgagcatt actttggaag tgcctacact 420 gcgaaaggaa aacagaaagg aaaggtcacg ggtatggggg cgaagaatag gaagtttata 480 aatatgtatg gcttcgaccc gactgagtac tcttttgtga gatttgtgga cccgttgaca 540 ggattggtat ttgatgactc accatacaca gatattcaac tggttcaaga aaagattggt 600 gatgcgaggc ataaggcaat acttgaggat aagctctccc gcgagaggat atcacacaat 660 cctggagtta gtgcatatta tatcaatgag attacaaatg cggcattgaa ggttgatctc 720 acaccacaca acccattact tgcatgtgag agacatagca caatagctgg acatccagat 780 catgagggtg agttacggca aactggctcc gttgttaaga ttgatattag agatgtgccg 840 gagaacccag aagaagcatc gcttgtggga catgagagca aatccctttt caggggtttg 900 agggactaca atccaattgc aagtgtaata tgccatttag taaatgaagc agatggtagg 960 acaagtgatt catatggcat tggatatggc ggtctaatca tcacgaatag acatctattc 1020 aagcgtaata atggaactct cacaatacgc tcgcgacatg gggaattcgt gattaagaat 1080 accactcaac tgggtatgaa accatgtgct gaccgtgaca tattgataat aaagatgccc 1140 aaagacatcc caccttttcc acagagactt cagtttaggg ttcccaagga gaatgagcgc 1200 atttgtctag taggttcaaa ctttcaagac aaatctatca caagcactgt ctctgaaacg 1260 agtgtcacat gtcatgtacc aaattcacat ttttggaagc attggataga cacaaaagat 1320 ggacattgtg gcttacctct tgtaagcaca gttgatggtg cgattttggg ggttcatagc 1380 ttatcaaatc tcacaaacac tcaaaacttc tttgcagctg tccctgcaaa ctttgaaatt 1440 gattacttaa aaacgtccga ggcgactgaa tggatcaaga aatggagtta caacccaaac 1500 gaaatctgtt gggggacttt ggaacttaaa acaggacaac cagttgcacc ttttaaagtc 1560 atcaagttga taacagatct tgacagtatg caagtgtatg ctcaagcgcg ctcggacaaa 1620 tgggtgctag acaggttgta tgggaatttg aaagctgtgg gacagtgtcc agcgcaactt 1680 gtcacaaaac acgttgtgaa gggaaagtgt atgttgtttg atttgtatct tcaacaagat 1740 cacgatgtta gaagcttttt caaaccttta atgggagcat atgggaagag tagattaaac 1800 aaggaagcat acaacaagga tttattcaag tatgcaactc caatcaatgc aggggatgtg 1860 tgtcacaaaa catttgagca ggcagagcta acagttgtcg agatgctcaa agcaaatggt 1920 tttcataagt gtaactacat tacagatccg gaggaaattg tcaaggcact caacatgaaa 1980 gcagctgtcg gagcaatgta tagtggaaag aagaaagatt attttgatgg tatgagcgac 2040 gaggatatcg aaaatcttct ttttcacagc tgtaagcggt tgtacatggg gcagaaagga 2100 ctttggaatg gttccttaaa ggctgagctc agaaccatgg caaaagttga attgaacaaa 2160 acaagaactt ttacagcggc cccacttgac acacttttgg gtggtaaaac atgtgttgat 2220 gattttaaca atatgtttta caacaaccat ctcaagtgcc catggacagt aggcatcaca 2280 aaattctatc aaggatggga tagattgtta acatctttac ctgaaaattg gatttattgt 2340 gatgcggatg gttctcaatt tgacagctct ctgtcaccct atcttattaa tgctgtcctc 2400 aatatacgga gggaattcat ggaagaatgg gacatagggg accaaatgct tcgaaatttg 2460 tacacagaga ttgtatacac gccgatttta acaccagatg gaaccatagt gaagaagttc 2520 aaaggaaata acagtgggca accatcaacc gtcgtggaca atacattgat ggttgtgttg 2580 gccgtctact acactttgtt gaaattgggt gtttcagagt tcgagatcag tgaacggtgc 2640 gtattctttg caaatgggga tgatctactg ttagctatga gaccagatac agctaatctt 2700 ttggatagct tcggtgagtg ctttgctgag cttgggctta actatgactt ctcatcaagg 2760 acaactaaga aagaggaatt atggttcatg tctcactgtg gaatcaaacg agatggaata 2820 tacattccta aactcgagcc tgaacgaata gtatctattc ttgaatggga tagatcacat 2880 gagcctgtac acagactcga agcaatttgt gctgcaatgg tggaagcgtg gggctatgat 2940 gaacttctcc atcaaattag aaaattttat gcatgggtct taggacaagc accatacagt 3000 gaactagcac gaactggaaa ggccccatat attgctgaaa ctgcacttaa atcattgtac 3060 actggagtac aacctatcgc tgacgatctc agcgagtaca cgcgtgttct taacgagatg 3120 tatgatgata gccttctcca agacaatgac ttatcggtgt atcatcagtc tggcaacccc 3180 cctgaattta aagatgcggg tgcaaaccca ccagcaccaa aaccaaaagg ggcatataca 3240 gcaccagaaa tcacagaggt tattgagccg gaggatcccc aacaagctgc gcttcgcgaa 3300 gctagacaga aacaacctgc tgtcgtaccc gaatcatacg gtagggacac aggtgagaga 3360 cctatgcgct ctgtttcacc acaaagagtg aaagacaagg atgtcaacgt tggcacgaca 3420 ggcacatttg tggtgccacg agttaagctc catactagca aaatgcggca acctagagtt 3480 aatggactct ctgtagtaaa cctacaacac ctcgcaactt atgaacctga gcaacataac 3540 attgggaata cacgctcaac tcaggaacag tttcgagcat ggtatgaagg tgttaagggt 3600 gattatggtg ttgatgatgc tggaatggca atcttgttga atggattgat ggtatggtgc 3660 atagagaatg gaacatctcc gaatataaat ggcgtttgga cgatgatgga tggggatgaa 3720 caagtgacgt atcccataaa gccattactg gatcatgcag tgcctacttt taggcaaatc 3780 atgacacact tcagtgacgt tgctgaagcg tatatagaaa tgagaaatcg caccaaggca 3840 tatatgccta ggtatggatt acaacgtaac ttgactgata tgagtcttgc gcgatatgca 3900 tttgatttct atgagctgca ctcaacaaca cctgcacgtg ctaaagaagc acacatgcag 3960 atgaaagcag ccgcacttaa gaatgcgcat aatcggttgt ttggtttgga tggaaacgtc 4020 tccacgcaag aagaggatac ggagaggcac actgcgactg atgttactag aaatatacat 4080 aacctcttag gaatgagggg tgtgcagtag gtgaaacttt gcactgtatt tatttactta 4140 tgtggttttt agtatgcctt tatttaaatt cgtgtccttc agtcccgaca gagatggttg 4200 ggtgtatcgg cagagtgggt ttttagcctg gtctatacac ttgagaagtt tctggtctat 4260 tacgtatcat aagggactct taaaagtgag gagtacctcg taagaaaagc ctttttggtt 4320 cgtgatcgag cc 4332 //