ID FJ795752; SV 1; linear; genomic RNA; STD; VRL; 5025 BP. XX AC FJ795752; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate MBL92b polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-5025 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-5025 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 394ada2bd50041535f4493ed513bfa0d. XX FH Key Location/Qualifiers FH FT source 1..5025 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea batatas" FT /isolate="MBL92b" FT /mol_type="genomic RNA" FT /country="Uganda:Mbale" FT /db_xref="taxon:12844" FT CDS <1..4803 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7J4" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E1U7J4" FT /protein_id="ACY74484.1" FT /translation="RIGYTEKGLVDIPQTVATEAAFLCFAYGLPVMTPNVSTSLLGSCT FT VKQARTMLQFELTPFYMVNMVRFDGTMHHAIHQLLKRYKLRDAETTLNKLAIPNRGVTG FT WMSAADYRKVGQRLDIEDQIRIPFYHQSMPEKLHSDIWEAIQRYKHEAGFGRVSCINSC FT KIAYTLQTDVYAIPRTIKILDALIADELRKKEHYKTITGRTVSSSSFTLNSIATLWRNR FT YAQDYTSENIAVLSSVRAQLLEFENLSMDASYNEMSKGILETYVRESGATTCVLHQTKS FT DLAKHLQLKGIWNKSVITQDLLVLAGVFVGGIWMVFSGTKESFEQTVTHQGKEKRQRQK FT LKFRQARDKKLGFEVHADDGTIEHYFGSAYTAKGKQKGKVTGMGAKNRKFINMYGFDPT FT EYSFVRFVDPLTGLVFDDSPYTDIQLVQEKIGDARHKAILEDKLSRERVSYNPGVSAYY FT INEITNAALKVDLTPHNPLLACERHNTIAGHPDHEGELRQTGVAVKVDIRDVPENPEEA FT SLVGHESKSLFRGLRDYNPIASVICHLVNEADGRTSDSYGIGYGGLIITNRHLFKRNNG FT TLTIRSRHGEFVIKNTTQLGMKPCADRDILIIKMPKDIPPFPQRLQFRIPKENERICLV FT GSNFQDKSITSTVSETSVTCHVPNSHFWKHWIDTKDGHCGLPLVSTVDGAILGVHSLSN FT LTNTQNFFAAVPANFEVDYLKTPEATEWIKKWSYNPSEICWGTLELKTGQPIAPFKVTK FT LITDLDSMQVYAQARSDKWVLDRLYGNLKAVGQCPAQLVTKHVVKGKCMLFDLYIQQDC FT DVRNFFKPLMGAYGKSRLNKEAYNKDLFKYATPINAGDVCHKTFEQAELAVVNMLKANG FT FHECNYITDPEEIVKALNMKAAVGAMYSGKKKDYFDGMDDKDIENLLFHSCKRLYMGQK FT GLWNGSLKAELRPIAKVELNKTRTFTAAPLDTLLGGKTCVDDFNNMFYNNHLKCPWTVG FT ITKFYQGWDRLLMALPENWIYCDADGSQFDSSLSPYLINAVLNIRREFLEEWDIGDQML FT RNLYTEIVYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVVLAVYYTLLKLGVSELEI FT SERCVFFANGDDLLIAMRPDTVHLLDNFGECFAELGLNYDFSSRTTKKEELWFMSHCGI FT KRDGMYIPKLEPERIVSILEWDRSHEPIHRLEAICAAMVVAWGYDELLHQIRKFYAWVL FT GQAPYSELARTGKAPYIAETALKSLYTGVQPSVDDLSEYTRVLNEMYDDSLLQDSDSSV FT YHQSGNPPEFKDAGANPPAPKPKGPYTAPEITEITEPEDPKQAALREARQKQPAVTPES FT YGRDTGEKSMRSTSPQRVKDKDVNVGTTGTFMVPRVKLHTSKMRQPRVNGISVVNLQHL FT ATYEPEQYNIGNTRSTQEQFRAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGTSPNIN FT GVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQR FT NLTDMSLARYAFDFYELHSTTPARAKEAHMQMKAAALKNAHNRLFGLDGNLSTQEEDTE FT RHTATDVTRNIHNLLGMRGVQ" FT mat_peptide <1..834 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 835..993 FT /product="6K2 protein" FT mat_peptide 994..1569 FT /product="VPg protein" FT mat_peptide 1570..2298 FT /product="NIa-Pro protein" FT mat_peptide 2299..3861 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3862..4800 FT /product="coat protein; CP" XX SQ Sequence 5025 BP; 1597 A; 978 C; 1175 G; 1275 T; 0 other; cgcatcggat acacagaaaa aggtttagtt gacatacccc aaacagttgc aactgaagca 60 gcatttctgt gttttgctta tgggttgccg gtcatgacac caaatgtgtc cacaagtctt 120 ctgggctcgt gtactgtcaa gcaagcacga actatgctac aatttgagtt aaccccattc 180 tacatggtga atatggttcg gtttgatgga actatgcacc acgcgatcca ccaactcctc 240 aaaagataca agctcagaga tgcagaaaca acactcaata agttagcaat tcccaacaga 300 ggagtcacag ggtggatgtc agcagcagat tacaggaaag tggggcaacg attggacatt 360 gaggaccaaa tcagaatacc cttttatcac cagtcaatgc cagaaaaatt gcatagtgac 420 atctgggagg caattcaaag atacaagcat gaagcaggat tcggccgcgt ttcatgtatc 480 aactcgtgca aaattgccta cacactccaa acagacgtgt atgccatccc tcgcactatc 540 aaaatcttgg acgcactgat agctgatgag ctgaggaaaa aggagcacta taagacaata 600 acaggtagaa ctgtttcaag tagtagcttc actttaaact caatcgcaac actatggagg 660 aacagatacg cacaagatta cacaagtgaa aacatagctg tattatcatc agtcagagca 720 caactcctcg aatttgaaaa tttgagtatg gacgcctcat ataacgaaat gagcaaaggg 780 atccttgaaa cgtatgtgcg tgagagtggt gccaccacgt gtgtcttgca ccaaacaaaa 840 agtgatcttg caaagcatct acagcttaag ggcatttgga ataagtccgt gataacacaa 900 gatcttttgg tgctagcagg agtttttgta ggtggtatat ggatggtgtt ttcgggcaca 960 aaagaatctt ttgagcagac agttacacac caaggaaaag agaaaagaca aaggcaaaag 1020 ttgaagttcc ggcaagctcg tgataagaaa ctaggttttg aggtgcatgc agatgatggc 1080 acaattgaac attactttgg aagcgcctat actgcaaaag gcaaacagaa aggaaaggtt 1140 acgggtatgg gggcgaagaa taggaaattc ataaatatgt atggcttcga cccaactgaa 1200 tattcctttg taagatttgt ggacccattg acaggattgg tgtttgatga ctcaccatac 1260 acagacattc aactggttca agaaaagatt ggtgatgcga gacataaggc aatacttgag 1320 gataagctct cccgtgagag ggtatcatat aatcctgggg ttagcgcata ttacatcaat 1380 gagattacaa atgcggcatt gaaagtagat ctcacaccac ataacccgct acttgcatgt 1440 gagagacata acacaatagc tggacatcca gatcatgagg gtgagctacg acagactggt 1500 gtcgccgtta aagttgatat tagagatgtg ccggagaacc cagaggaagc atcgcttgtg 1560 ggacatgaga gcaaatccct ttttaggggt ttgagggatt acaatccaat tgcaagtgta 1620 atatgccatt tagtgaatga agcagatggc agaacaagtg attcatatgg cattgggtat 1680 ggcggtctaa ttatcacgaa taggcatcta tttaagcgta ataatggaac tctcacgata 1740 cgctcacgac atggagaatt cgtgattaag aacaccactc aactgggtat gaaaccatgt 1800 gctgaccgtg acatattgat cataaagatg cctaaagata tcccaccctt tccacagaga 1860 cttcagttta ggatccccaa ggagaatgag cgcatttgtc tagtaggttc gaatttccaa 1920 gacaaatcta tcacaagcac tgtctctgaa acaagtgtca catgtcatgt gccaaactca 1980 catttttgga agcattggat agatacaaaa gatggacatt gtggcttacc tcttgtaagc 2040 acagtcgatg gtgcgattct gggtgttcat agtttgtcaa accttacaaa tacccaaaac 2100 ttctttgcag ctgtccctgc aaactttgag gtcgattact taaaaacgcc tgaggcaact 2160 gaatggatta agaaatggag ttataaccca agtgaaatct gttggggaac tttggaactt 2220 aagacagggc aaccaattgc accttttaaa gtcaccaagt tgataacaga tcttgatagc 2280 atgcaggtgt atgctcaagc acgctcggat aaatgggtgc tagacaggtt gtatggaaac 2340 ttgaaagccg tgggacagtg cccagcacag cttgttacaa aacacgttgt gaagggaaag 2400 tgtatgcttt ttgatttgta tattcaacaa gattgcgatg ttagaaactt tttcaaacct 2460 ttgatgggag catatggaaa gagtagattg aacaaggaag catacaacaa ggatttattc 2520 aagtatgcaa ctccaatcaa cgcaggggat gtatgtcaca aaacatttga gcaagcagag 2580 ttagcagttg tcaatatgct caaagcaaat ggttttcatg agtgtaacta catcacagat 2640 ccagaggaaa ttgtcaaagc actcaacatg aaagcagctg tcggagcaat gtacagtgga 2700 aagaagaaag actattttga tggaatggac gacaaggata tcgaaaatct ccttttccac 2760 agttgtaagc gattgtacat ggggcaaaaa gggctttgga atggttcctt aaaggctgag 2820 cttaggccca tagcaaaagt tgaactgaac aaaacaagga cttttacagc agctccactc 2880 gacacacttt tgggtggtaa aacatgtgtt gatgatttca acaacatgtt ttacaacaac 2940 catctcaaat gcccatggac agtaggcatc acaaaattct atcaaggatg ggatagattg 3000 ctaatggctc tacctgaaaa ttggatttat tgtgatgcgg atggttctca atttgatagt 3060 tctctgtcac cctatcttat taatgctgtc ctcaatatac ggagggaatt cctggaagaa 3120 tgggacatag gggaccaaat gctccgaaat ttgtacacag agattgtata cacaccgatt 3180 ctaacaccag atggaactat agtgaagaag ttcaaaggaa acaacagtgg gcaaccgtca 3240 accgtcgtgg acaatacact gatggtcgtg ttggccgtct actacacttt gttaaaatta 3300 ggtgtttcag agcttgagat cagtgaacgg tgtgtattct tcgcaaatgg ggatgatcta 3360 ctgatagcta tgagaccaga tacagtgcat cttttggaca acttcggtga gtgctttgct 3420 gagcttgggc ttaactacga tttctcatca aggacaacca agaaagagga attatggttc 3480 atgtctcact gtggaatcaa aagagatgga atgtacatcc ctaaacttga gcctgaacga 3540 atagtatcta ttcttgaatg ggatagatca cacgagccta tacataggct tgaagcgatt 3600 tgtgctgcaa tggtggtagc gtggggctat gacgaacttc tccaccaaat tagaaaattt 3660 tatgcatggg tcttaggaca agcaccatac agtgaactag cacgaactgg aaaggctcca 3720 tatattgctg aaacagctct taaatcactg tatactggag tacaacctag cgttgatgat 3780 ctcagcgagt acacacgtgt ccttaatgag atgtatgatg atagcctcct tcaagacagt 3840 gactcatcgg tgtatcatca atctggcaac ccccctgaat ttaaagatgc aggtgcaaac 3900 ccaccagcac caaagccaaa agggccatat acagcaccag agatcacaga gattactgag 3960 ccggaggatc ccaaacaagc tgcgcttcgc gaagccagac agaaacaacc tgctgttaca 4020 cccgagtcat acggtagaga tacaggtgag aaatctatgc gctctacttc accacaaagg 4080 gtgaaagata aggatgtcaa cgttggcacg acaggcacat ttatggtgcc acgagttaag 4140 ctccatacta gcaaaatgcg ccaacctaga gtcaatggta tttctgtagt aaacttacag 4200 catcttgcaa cttatgaacc tgagcaatac aacattggga atacgcgctc aactcaggaa 4260 cagtttcgag catggtatga aggtgttaag ggtgattatg gcgttgatga cgctgggatg 4320 gcaatcttgt tgaatggatt gatggtatgg tgcatagaga atggaacatc tccaaatata 4380 aatggcgttt ggacgatgat ggatggggat gaacaagtga cgtaccccat aaagccatta 4440 ctggatcatg cagtgcctac ttttaggcaa atcatgacac acttcagtga cgttgctgaa 4500 gcgtatatag aaatgagaaa tcgtaccaag gcatatatgc ctaggtatgg attacaacgt 4560 aacttgactg atatgagtct tgcgcgatat gcatttgatt tctatgagct gcactcaaca 4620 acacccgcac gtgctaaaga agcacacatg cagatgaagg cagctgcact taagaatgcg 4680 cataatcggt tgtttggttt ggatggaaac ctctccacgc aagaagagga tacggagagg 4740 cacactgcga ctgatgttac tagaaatata cataacctct taggaatgag gggtgtgcag 4800 taggtgaaac tttgcactgt atttatttac ttgtgtgatt tttagtatgc ctttatttaa 4860 attcgtgtcc ttcagtcccg acagagatgg ttgggtgtat cgacagagtg ggcttttagc 4920 ctggtccata cacttgagaa gtttctggtc tattacgtat cataagggac tcttaaaagt 4980 gaggagtacc tcgtaagaaa agcctttttg gttcgggatc gagcc 5025 //