ID FJ795751; SV 1; linear; genomic RNA; STD; VRL; 5024 BP. XX AC FJ795751; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate KNG59b polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-5024 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-5024 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; f312c529e737e0b20b2e7108d41de2bc. XX FH Key Location/Qualifiers FH FT source 1..5024 FT /organism="Sweet potato feathery mottle virus" FT /host="Lepistemon owariensis" FT /isolate="KNG59b" FT /mol_type="genomic RNA" FT /country="Uganda:Kanungu" FT /db_xref="taxon:12844" FT CDS <1..4803 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7J3" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E1U7J3" FT /protein_id="ACY74483.1" FT /translation="RIGYTEKGLVDIPQTVATEAAFLCFAYGLPVMTPNVSTSLLGSCT FT VKQARTMLQFELTPFYMVNMVRFDGSMHHAIHQLLKRYKLRDAETTLNKLAIPNRGITG FT WMSAADYRKVGQRLDIEDQVRIPFYHQSMPEKLHSDIWEAIQRYKHEAGFGRVSCINSC FT KIAYTLQTDVYAIPRTIKILDALIADEMRKKEHYKTITGRTVSSSSFTLNSIATLWRNR FT YAQDYTSENIAVLSSARAQLLEFENLSMDASYNEMSKGILETYVRENGATTCVLHQTKS FT DLAKHLQLKGIWNKSVITQDLLVLAGVFVGGIWMVFSGAKESFEQTVKHQGKEKRQRQK FT LKFRQARDRKLGFEVHADDGTIEHYFGSAYTAKGKQKGKVTGMGAKNRKIINMYGFDPT FT EYSFVRFVDPLTGLVFDDSPYTDIQLVQEKIGDARHKAILEDKLSRERISFNPGISAYY FT INEITNAALKVDLTPHNPLLACERHNTIAGHPDHEGELRQTGSVVKIDIKDVPENPEEA FT SLVGHESKSLFRGLRDYNPIASVICHLVNEADGRTSDSYGIGYGGLIITNRHLFKRNNG FT TLTIRSRHGEFVIKNTTQLGMKPCADRDILIIKMPKDIPPFPQRLQFRIPKENERICLV FT GSNFQDKSITSTVSETSVTCHVPNSHFWKHWIDTKDGHCGLPLVSTVDGAILGVHSLSN FT LTNTQNFFAAVPANFEIDYLKTPEATEWIKKWSYNPSEICWGTLELKTGQPVAPFKVTK FT LITDLDSMQVYAQARSDKWVLDRLYGNLKAVGQCPAQLVTKHVVKGKCMLFDLYLQQDY FT DVRSFFKPLMGAYGKSRLNKEAYNKDLFKYATPINAGDVCHKTFEQAELAVVDMLKANG FT FHKCNYITDPEEIFKALNMKAAVGAMYSGKKKDYFDGMVDEDIENLLFHSCKRLYMGQK FT GLWNGSLKAELRPMAKVELNKTRTFTAAPLDTLLGGKTCVDDFNNMFYNNHLKCPWTVG FT ITKFYQGWDRLLTSLPEDWIYCDADGSQFDSSLSPYLINAVLNIRREFMEEWDIGDQML FT RNLYTEIVYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVVLAVYYTLLKLGVSELEI FT SERCVFFANGDDLLIAMRPDTAHLLDNFGECFAELGLNYDFSSRTTKREELWFMSHCGI FT KRDGIYIPKLEPERIVSILEWDRSHEPIHRLEAICAAMVEAWGYDELLHQIRKFYAWVL FT GQAPYSELARTGKAPYIAETALKSLYTGVQPSADDLSEYTSVLNEMYDDSLLQDNDLTV FT YHQSGNPPEFKDAGANPPAPKPKGPYTAPEITEVTEPEDPKQAALSEARQKQPAVVPES FT YGRDTSEKPMRSVSPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRVNGISVVNLQHL FT ATYEPEQHNIGNTRSTQEQFQAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGTSPNIN FT GVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQR FT NLTDMSLARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLDGNVSTQEEDTE FT RHTATDVTRIIHNLLGMRGVH" FT mat_peptide <1..834 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 835..993 FT /product="6K2 protein" FT mat_peptide 994..1569 FT /product="VPg protein" FT mat_peptide 1570..2298 FT /product="NIa-Pro protein" FT mat_peptide 2299..3861 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3862..4800 FT /product="coat protein; CP" XX SQ Sequence 5024 BP; 1600 A; 970 C; 1162 G; 1292 T; 0 other; cgtatcggat acacagaaaa aggtttagtt gacatacctc aaacagttgc gactgaggca 60 gcatttctgt gttttgctta cgggttgcca gtcatgacac ctaatgtgtc cacaagtctt 120 cttggttcgt gtactgttaa gcaggcacga actatgctac aatttgagtt aactccattc 180 tacatggtga atatggttcg gtttgatgga tctatgcacc acgcaattca ccaactcctc 240 aaaagataca agctcagaga tgcagaaaca acgctcaata agttggcaat tcccaacaga 300 ggaattacag gatggatgtc agcagcagat tacaggaaag ttgggcaacg gttggatatt 360 gaggaccaag tcagaatacc cttttatcac caatcaatgc cagagaaatt gcatagcgac 420 atctgggaag caattcaaag atacaagcat gaagctggat ttggtcgtgt ttcatgtatt 480 aactcgtgca aaattgccta cacactccaa acagacgtgt atgctatccc tcgcactatc 540 aagattctgg acgcactgat tgctgatgag atgaggaaaa aggagcacta caagacaata 600 acaggtagaa ccgtttcgag tagtagcttt actttaaatt caatcgcaac actgtggagg 660 aatagatatg cacaggatta tacgagcgaa aacatagctg tattatcatc agccagagcg 720 caactcctcg aatttgaaaa tttgagtatg gatgcctcat ataacgaaat gagcaaagga 780 atccttgaaa cgtatgtgcg tgagaatggt gccactactt gtgtattgca ccaaacaaag 840 agtgatctcg cgaagcatct acagcttaag ggcatttgga ataaatccgt gataacacag 900 gatcttctgg tactagcagg agtttttgtt ggtggtatat ggatggtgtt ttcgggtgca 960 aaagaatctt ttgagcagac agttaagcat caaggaaaag agaaaagaca aaggcaaaaa 1020 ttgaagttcc ggcaggctcg tgataggaaa ctaggttttg aggttcacgc agatgatggc 1080 acaattgagc attactttgg aagtgcatat actgcgaaag gcaaacagaa aggaaaggtt 1140 acgggtatgg gggcgaaaaa taggaagatc ataaatatgt atggctttga cccaactgaa 1200 tactcctttg taagatttgt ggacccgttg acaggattag tgtttgatga ctcaccatac 1260 acagatattc aactggtgca agaaaagatt ggtgatgcga ggcataaggc aatacttgag 1320 gataagctct cccgcgagag aatctcattc aatcctggga ttagtgcata ttacatcaat 1380 gagattacaa atgcggcatt gaaggtagat ctcacaccac acaacccact acttgcatgt 1440 gagagacata acacaatagc tggacatcca gatcatgagg gtgagttacg acagactggc 1500 tctgttgtta agattgatat taaagatgtg ccggagaacc cagaagaagc atcgcttgtg 1560 ggacatgaga gcaaatccct tttcaggggt ttgagggact acaatccaat tgcaagtgtg 1620 atatgccatt tagtgaatga agcagacggt aggacaagtg attcatatgg cattggatat 1680 ggcggtctaa tcatcacaaa tagacactta ttcaagcgta ataatggaac tctcacaata 1740 cgctcgcgac atggggaatt cgtgattaag aataccactc aactgggtat gaaaccatgc 1800 gctgaccgtg acatattgat aataaagatg cccaaagata tcccaccttt tccacagaga 1860 cttcaattca ggattcccaa ggagaatgag cgcatttgtc tagtaggttc aaacttccaa 1920 gacaaatcta ttacaagcac cgtctctgaa acgagcgtca catgtcatgt gccaaactca 1980 catttttgga agcattggat agatacaaaa gatggacatt gtggcttacc tcttgtaagc 2040 acagttgatg gtgcgatcct gggggttcat agtttgtcaa atctcacaaa cacccaaaac 2100 ttctttgcag ctgtccctgc aaactttgag attgattact taaaaacccc cgaggcaact 2160 gaatggatta agaaatggag ttataaccca agcgaaatct gttggggaac tttggaactc 2220 aagacaggac aaccagttgc accttttaaa gtcaccaagc tgataacaga tcttgatagt 2280 atgcaagtat acgctcaagc gcgttcggat aaatgggtgc tagataggtt atatggaaac 2340 ttgaaagctg tgggacagtg tccagcacaa cttgttacaa aacacgttgt gaaaggaaaa 2400 tgtatgcttt ttgatttgta tcttcaacaa gattacgatg ttagaagctt tttcaagcct 2460 ttaatgggag catatgggaa gagcagattg aataaagaag catacaacaa ggatctattc 2520 aagtatgcaa ctccaatcaa tgcaggagat gtgtgtcaca aaacatttga gcaggcagag 2580 ttagcagttg tcgacatgct caaagcaaat ggttttcata agtgtaacta catcacagat 2640 ccggaggaaa ttttcaaagc actcaacatg aaggcagctg ttggagcaat gtacagtgga 2700 aagaagaaag actattttga tggtatggtc gatgaggata tcgaaaatct tctttttcac 2760 agctgtaagc ggttgtacat ggggcaaaaa ggactttgga atggctcctt aaaggctgag 2820 cttaggccca tggcaaaagt tgaattgaat aaaacaagga cttttacggc agccccactt 2880 gacacacttt tgggtggtaa aacatgtgtt gatgatttca acaacatgtt ttacaacaat 2940 catctcaaat gcccatggac agtaggcatc acaaaattct accaaggatg ggatagattg 3000 ttaacatctt tacctgaaga ttggatttac tgtgatgcgg atggttctca atttgacagt 3060 tctctgtcac cctatctcat taatgctgtc ctcaacatac ggagggaatt catggaagag 3120 tgggacatag gggaccaaat gcttcgaaat ttgtacacag agattgtata cacaccgatt 3180 ctaacaccag atggaaccat agtgaagaaa ttcaaaggaa acaatagtgg gcaaccctcg 3240 accgtcgtgg acaatacact gatggttgtg ttagccgtct actacacttt gttgaaattg 3300 ggcgtctcag agctcgagat cagtgaacgg tgcgtattct ttgcaaatgg ggatgatcta 3360 ctgatagcta tgagaccaga tacagctcat cttttggata atttcggtga gtgctttgct 3420 gagctcggac ttaactatga cttctcatca aggacaacta agagagagga attgtggttc 3480 atgtcccact gtggaatcaa acgagatgga atatacattc ccaaactcga gcctgaacga 3540 atagtatcta ttcttgaatg ggatagatca catgaaccta tacatagact tgaagcaatt 3600 tgtgctgcaa tggtggaagc gtggggctat gatgaacttc ttcatcaaat tagaaaattt 3660 tatgcatggg tcctaggaca agcaccatac agtgaactag cacgaactgg aaaggcccca 3720 tatattgctg aaactgcact taaatcactg tatactggag tacaacctag cgctgacgat 3780 ctcagtgagt acacaagtgt ccttaacgag atgtatgatg atagcctcct tcaagacaat 3840 gatttaacgg tgtatcacca atctggtaac ccccctgaat ttaaagatgc aggtgcgaac 3900 ccaccagcac caaagccaaa agggccatat acagcaccag aaatcacaga agttactgag 3960 ccggaggatc ccaaacaagc tgcacttagc gaggctagac agaaacaacc tgctgtcgta 4020 cccgaatcat acggtagaga tacaagtgag aaacctatgc gctccgtttc accacaaagg 4080 gtgaaagaca aggatgtcaa cgttggtacg acaggtacat ttttagtacc acgagttaag 4140 ctccatacta gtaaaatgcg ccaacctaga gtcaacggaa tctctgtagt aaacctacaa 4200 caccttgcaa cctatgaacc tgagcaacat aacattggga acacacgctc aactcaggaa 4260 cagtttcaag catggtacga aggtgtcaag ggtgattatg gtgttgatga cgctggaatg 4320 gcaatcttgt tgaatggatt gatggtatgg tgcatagaga atggaacatc tccaaacata 4380 aatggcgttt ggacgatgat ggatggggat gaacaagtga cgtaccccat aaagccatta 4440 ctggatcatg cagtgcctac ttttaggcaa atcatgacac acttcagtga cgttgctgaa 4500 gcgtatatag aaatgagaaa tcgtaccaag gcatatatgc ctaggtatgg attacaacgt 4560 aatttgactg atatgagtct tgcgcgatat gcatttgatt tctatgagct gcactcaaca 4620 acacctacac gtgctaaaga agcacacatg cagatgaaag cagctgcact taagaatgcg 4680 cataatcggt tgtttggttt ggatggaaac gtctccacgc aagaagagga tacggagagg 4740 cacactgcga ctgatgttac tagaattata cataacctct taggaatgag gggtgtgcac 4800 taggtgaaac tttgcactgt atttatttac ttatgtggtt ttagtatgcc tttatttaaa 4860 ttcgtgtcct tcagtcccga cagaaatggt tgggtgtatc gacagagtgg gcttttagcc 4920 tggtccatac acttgagaag tttctggtct attacgtatc ataagggact cttaaaagtg 4980 aggagtacct cgtaagaaaa gcctttttgg ttcgtgatcg agcc 5024 //