ID   FJ795747; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   FJ795747;
XX
DT   05-OCT-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus isolate SOR33 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RX   DOI; 10.1111/j.1365-294X.2010.04682.x.
RX   PUBMED; 20609081.
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.;
RT   "Molecular genetic analysis of virus isolates from wild and cultivated
RT   plants demonstrates that East Africa is a hotspot for the evolution and
RT   diversification of sweet potato feathery mottle virus";
RL   Mol. Ecol. 19(15):3139-3156(2010).
XX
RN   [2]
RP   1-1814
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.;
RT   ;
RL   Submitted (25-FEB-2009) to the INSDC.
RL   Department of Applied Biology, University of Helsinki, P.O. Box 27
RL   (Latokartanonkaari 7), Helsinki FIN-00014, Finland
XX
DR   MD5; f6417636b4cea9dc2fe8edde68dd620a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea tenuirostris"
FT                   /isolate="SOR33"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Soroti"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E1U7I9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:E1U7I9"
FT                   /protein_id="ACY74479.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAHLLDRFGECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSILQENDLEVYHQSDEKTEF
FT                   KDAGADPPAPKPKNVPPPPTITEITDPEDPKQEALKAARAKQPAVIPESYGRDTSKERE
FT                   SIVGASSKSVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body; NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein; CP"
XX
SQ   Sequence 1814 BP; 569 A; 331 C; 429 G; 485 T; 0 other;
     ggtaataata gtggtcagcc atctactgtg gttgataata cacttatggt tgtgttggca        60
     gttcactaca cattgctgaa actaggaatc caagagagcg agtttgataa atgttgtgtc       120
     tttttcgcaa atggtgatga tttattattg gcaatgaggc cagatacagc ccatttactg       180
     gataggtttg gtgaatgttt ttctgaatta ggactcaatt atgacttttc atcacgaaca       240
     aataagaagg aagatctatg gtttatgtca cactgtggcg tgaaacgcga tggaatattt       300
     ataccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgcc gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttgg accaagcccc atacaatgaa       480
     ctagcacgaa atgggaaagc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ccaatgcctc tgaattgagt gcttatacga gagtgctcaa agaaatgtat       600
     gatgacagta tactccaaga gaatgatttg gaagtatatc atcaatctga tgagaaaact       660
     gaatttaaag atgcaggagc ggaccctcca gctcctaagc ctaagaacgt tcctccacca       720
     cccacaataa ctgaaatcac tgatccagag gacccgaagc aggaagcttt gaaagctgca       780
     cgagcaaagc aacccgcggt tattccagaa tcatatggac gagacacgag caaagaaagg       840
     gagtcaatag tgggggcatc atcaaagagt gtgagggata aagatgtgaa tgttggcact       900
     gttggtacat ttgttgtgcc acgtgtcaag atgaatgcaa ataagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcaattt      1020
     gaggttgcaa acacccggtc aactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgttgacga cacagggatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggacaatgat ggatggtgat      1200
     gaacaagtaa catatccaat taaaccatta ctggaccatg cagtgcctac ttttaggcag      1260
     atcatgacgc acttcagtga cgttgctgaa gcttacatag agatgcgaaa ccgtacaaag      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcgc gtgctaaaga agcacattta      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt agacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc ttttatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatagtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggaatacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//