ID   FJ795745; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   FJ795745;
XX
DT   05-OCT-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus isolate MAS52 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RX   DOI; 10.1111/j.1365-294X.2010.04682.x.
RX   PUBMED; 20609081.
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.;
RT   "Molecular genetic analysis of virus isolates from wild and cultivated
RT   plants demonstrates that East Africa is a hotspot for the evolution and
RT   diversification of sweet potato feathery mottle virus";
RL   Mol. Ecol. 19(15):3139-3156(2010).
XX
RN   [2]
RP   1-1814
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.;
RT   ;
RL   Submitted (25-FEB-2009) to the INSDC.
RL   Department of Applied Biology, University of Helsinki, P.O. Box 27
RL   (Latokartanonkaari 7), Helsinki FIN-00014, Finland
XX
DR   MD5; acec7dcfa381ffb56c22c72bea29ac02.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea tenuirostris"
FT                   /isolate="MAS52"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Masindi"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E1U7I7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:E1U7I7"
FT                   /protein_id="ACY74477.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAFHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAHLLDKFGECFSELGLNFDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLNQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENDLEVYHQSDEKTEF
FT                   KDAGADPPAPKPKNIPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERE
FT                   SIVGASSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTNPARAKEAHLQMKAAAIKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body; NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein; CP"
FT   3'UTR           1594..1814
XX
SQ   Sequence 1814 BP; 572 A; 331 C; 426 G; 485 T; 0 other;
     gggaacaaca gtggtcagcc atctactgtg gttgataata cacttatggt tgtgttagca        60
     tttcactaca cattgctgaa actaggaatc caagaaagcg agtttgataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattgttg gcaatgaggc cagatacagc ccatttactg       180
     gataagtttg gtgaatgttt ttctgaatta ggactcaatt ttgacttttc atcacgaaca       240
     aataagaagg aagatctatg gtttatgtca cattgtggcg tgaaacgtga tggaattttt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgcc gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttga accaagcccc atacaacgaa       480
     ctagcacgga atgggaaagc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ctaatgcctc tgagttgagt gcgtatacga gagtgctcaa agaaatgtat       600
     gatgacagta tgctccaaga aaatgatttg gaagtatatc atcaatctga tgagaaaact       660
     gaatttaaag atgcaggagc ggatcctcca gcccctaagc ctaagaacat tcctccacca       720
     cccacaataa ctgaaatcac tgatccagag gatccgaagc aggcagcttt aaaagctgca       780
     cgagcaaagc aacccgcggt cattccagag tcatatggac gagacacgag caaagaaagg       840
     gaatcaatag tgggggcatc atcaaagggt gtgagggata aagatgtgaa tgttggcacc       900
     gttggtacat ttgttgtgcc acgtgtcaag atgaatgcaa ataagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccaa cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccggtc aactcaagaa cagtttcaag catggtatga aggagttaaa      1080
     ggagattatg gtgttgacga cacagggatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaacata aatggtgtgt ggacaatgat ggatggtgat      1200
     gaacaagtaa catatccaat taaaccatta ctggaccatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcttacatag agatgcgaaa ccgtacaaag      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact aaccctgcac gtgctaaaga agcacattta      1440
     cagatgaagg cagccgccat taagaatgcg cgaaatcggt tgtttggttt agacggaaac      1500
     gtctctacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacaaca tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattatatct cggttattgc atttgaaaag tcacctttct      1740
     attacatatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//