ID   FJ792686; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   FJ792686;
XX
DT   19-FEB-2010 (Rel. 103, Created)
DT   21-APR-2010 (Rel. 104, Last updated, Version 2)
XX
DE   Citrus tristeza virus isolate JMSG2 major coat protein gene, complete cds.
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KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RX   DOI; 10.1007/s10658-009-9572-6.
RX   AGRICOLA; IND44349708.
RA   Fisher L.C., Tennant P.F., McLaughlin W.A.;
RT   "Detection and characterization of Citrus tristeza virus stem pitting
RT   isolates in Jamaica";
RL   Eur. J. Plant Pathol. 127(1):1-6(2010).
XX
RN   [2]
RP   1-672
RA   Fisher L.C., McLaughlin W.A., Tennant P.F.;
RT   ;
RL   Submitted (25-FEB-2009) to the INSDC.
RL   Life Sciences, University of the West Indies, Mona Campus, 2 St. John's
RL   Close, Kingston 7, Jamaica
XX
DR   MD5; 87a78e6f5bfcc3f1acec73e0dc509133.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Mexican lime"
FT                   /isolate="JMSG2"
FT                   /mol_type="genomic RNA"
FT                   /country="Jamaica"
FT                   /note="severe strain"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="major coat protein"
FT                   /db_xref="GOA:D3U779"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:D3U779"
FT                   /protein_id="ACS68172.1"
FT                   /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSVNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGVT
FT                   YTRDGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPTGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 198 A; 122 C; 167 G; 185 T; 0 other;
     atggacgacg aaactaagaa attgaagaac aaaaacaagg aaacgaaaga aggcgacaat        60
     gttgttgcgg ctgagtcttc tttcggttcc gtaaacttac acatcgatcc gactttgata       120
     gcgatgaacg atgtacgtca gttgggtacc caacagaatg ctgctttgaa tagagatttg       180
     tttcttacct tgaaagggaa gtatcctaac ttacctgaca aagataaaga ttttcactta       240
     gctatgatgt tgtatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc       300
     acgggtgtga cgtacactcg ggatggtgtt gaagtggaat tgtctgacaa actttggaca       360
     gacgtcgtgt ttaactctaa gggtattggt aaccgtacta acgcccttcg agtctggggt       420
     agaactaacg atgcccttta tttggctttt tgtagacaga accgcaactt gagttatggt       480
     ggacgtccgt tagatgcagg aattccaacc gggtatcact acctgtgtgc agatttcttg       540
     accggagccg gcttgactga tttagaatgt gcagtgtaca tacaagccaa agagcaatta       600
     ttaaagaagc gaggggctga tgaggttgta gttactaatg tcaggcagct tggcaaattt       660
     aacacacgtt ga                                                           672
//