ID FJ790327; SV 1; circular; genomic DNA; STD; VRL; 2666 BP. XX AC FJ790327; XX DT 25-MAR-2009 (Rel. 100, Created) DT 25-MAR-2009 (Rel. 100, Last updated, Version 1) XX DE Corchorus golden mosaic virus [India:Barrackpore2:2009] segment B, complete DE sequence. XX KW . XX OS Corchorus golden mosaic virus [India:Barrackpore2:2009] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2666 RA Ghosh R., Das A., Palit P., Ghosh S.K., Roy A.; RT "Detection and Characterization of a New World Begomovirus in Jute RT (Corchorus capsularis) from India"; RL Unpublished. XX RN [2] RP 1-2666 RA Ghosh R., Das A., Palit P., Ghosh S.K., Roy A.; RT ; RL Submitted (26-FEB-2009) to the INSDC. RL Crop Protection, Central Research Institute for Jute and Allied Fibres, RL Barrackpore, Kolkata, West Bengal 700120, India XX DR MD5; 697a70b0cba172290b734ebcada3c5cd. DR EuropePMC; PMC3550811; 23730007. XX CC GenBank Accession Numbers FJ790326-FJ790327 represent the complete CC genome of Corchorus golden mosaic virus [India:Barrackpore2:2009]. XX FH Key Location/Qualifiers FH FT source 1..2666 FT /organism="Corchorus golden mosaic virus FT [India:Barrackpore2:2009]" FT /segment="B" FT /host="Corchorus capsularis (jute)" FT /isolate="Barrackpore-2" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="2009" FT /clone="JMB-B2-18" FT /db_xref="taxon:627091" FT gene 345..1112 FT /gene="BV1" FT CDS 345..1112 FT /codon_start=1 FT /gene="BV1" FT /product="NSP protein" FT /db_xref="GOA:C0LZK5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:C0LZK5" FT /protein_id="ACN89273.1" FT /translation="MYIGKGIRYSDNTMNRAKYNRPVGRRGFGGRGGGKGRVNPSGPKG FT QGDKRTRQRIHENQYGVQYSLLNNTSSVSFITYPRLGGPEPNRSRAYIKLNRLRYKGTV FT NIECADPDVGMDPNRGGLSGVFTLAIVVDRKPHVGPTGSLPSFDDLFGCNLYSNGSLDI FT SPQMKQRYYIRHVHKRVVSYEKDSIMMNISGNMGLSSPKYVCWSSFKDLDVDSCTGSYS FT NLAKNALLVYYCWVSNMPSKASSFVSFDLDYLG" FT gene complement(1174..2052) FT /gene="BC1" FT CDS complement(1174..2052) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:C0LZK6" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:C0LZK6" FT /protein_id="ACN89274.1" FT /translation="MSSQLANAPNSFNYIESNRDEYRLTHDLTEIVLQFPSTAEQWGAT FT VRRRCMKIDHCVIEYRQQVPINASGSVIVEIHDTRMNDNESLQTTYTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVNQGTHFAKFKGKLKMSTAKHSVDVVFRSPTVKILS FT KQFTGKDIDFSHVEYGKVERKLIKSASSSRSALHSAIELRPGESWATRSSVGVDINETE FT SNVTHNTHPYRELHRLSTSVLDPGDSASLVAAARSESNITLSRAQLQELVNSTVDLCIN FT RNCTPQQAKPL" XX SQ Sequence 2666 BP; 739 A; 490 C; 611 G; 826 T; 0 other; accgtgcagc agccaaaaat ttttccgtac actttaattt gaattgggcg ccaattattg 60 atagtgacgt ctatatataa acggtcacga ttgcgccacg tgtctcaata ttggccatgg 120 ataaaaacta aatgtgaccc acgcgatatt tttccaaatt tgaaaaaaaa gaccgcgcgt 180 ttgtggatga taatattgga ttaactattt atagaaatga tttcgtccaa tcattgattg 240 acattggggt ttcattataa ctgaatggca tcatccaact ataaataaca gaaatatgtt 300 taataaatat aattaggtag ttttagcttt tttgttttgt aaaaatgtat attggtaaag 360 gtatacgtta cagcgataac accatgaatc gtgctaagta caacagacct gtgggtcgac 420 gaggttttgg tggtaggggc ggtggaaagg ggcgtgtgaa tccgtctggg cccaagggac 480 agggggacaa gaggaccaga cagcgtatcc atgaaaatca gtatggcgtg cagtattccc 540 tattgaacaa tacgtccagt gtgtctttta ttacgtatcc tagattaggt gggcctgagc 600 ccaataggag tcgggcttac ataaaattga ataggcttcg gtacaagggt actgttaata 660 ttgagtgtgc agacccagat gttggaatgg atcctaatcg tggtgggctt tctggtgtat 720 ttaccttggc catagttgtt gacaggaaac ctcatgttgg acctactggt tcactgccaa 780 gttttgacga tctgtttggg tgcaatctgt acagcaatgg gagccttgat atctcacccc 840 agatgaagca gcgttactac attcgacacg tacacaagcg tgtcgtatct tatgagaagg 900 actccatcat gatgaacata tcgggcaata tgggattatc ttctccaaaa tatgtatgtt 960 ggtcctcatt caaggacctt gatgtggata gttgcactgg gagctattct aatttagcca 1020 agaatgccct gttagtatat tattgttggg tatcgaacat gccttctaag gcatcatcat 1080 ttgtatcttt tgacctggat tatctgggtt aaattaataa aaatatattt gcaataataa 1140 caattgctgt taatttgtaa tttcattcat aattcataat ggttttgcct gttgaggcgt 1200 acaattcctg ttaatgcata agtcgacagt gctattgaca agttcttgta attgtgccct 1260 gctaagtgtg atgttggatt cggaacgcgc agctgcaacc agtgatgccg agtcacctgg 1320 gtccagcacg cttgtgctca gcctgtgaag ctctctgtat gggtgcgtgt tatgggttac 1380 gtttgactct gtctcgttaa tgtccactcc cactgagctt cttgtggccc aagattcacc 1440 gggccttagt tcaattgccg aatggagggc tgaccttgat gatgaagctg atttgatcag 1500 cttcctctcg accttcccat attcgacatg ggagaagtct atatctttcc cggtgaactg 1560 cttagacagt atctttacgg tgggagagcg aaaaacgaca tcaacggagt gcttggccgt 1620 ggacatcttc agcttgcctt tgaacttggc gaaatgtgtt ccctggttga cattagtgtc 1680 tgacaccctg tagtacagct tccatggaat tggatccttc agtgaaaaga aggaggcaga 1740 gaagtagtgg agatcgatgt tgcatctaat tgggaaggtg tatgttgttt gtaatgactc 1800 gttgtcattc atgcgtgtgt catgaatctc gacaattaca gagccagaag cgttaattgg 1860 cacttgttgt ctgtactcga tgacacaatg atctatcttc atgcaccttc tccttacagt 1920 tgcaccccat tgttctgcag ttgatgggaa ttgcaggact atctctgtga gatcatgggt 1980 gagcctgtac tcgtccctat tagactcaat gtaattaaaa gaattaggag cgttagctaa 2040 ttgagaactc atgatgagtt ctgggtcgcg cagcgaaacc agaaaaaatt gttatgtgat 2100 gatagactaa tgactaaaga aatgagacat tatatgtctg agatgaagaa gatgacagac 2160 tgttcataag aacatctggg tatggtgttt gcgttttgcg atggaactgg ttatatagac 2220 agacagatgt acggctctta atagagacag caatctctct ctctctctct ctctctctct 2280 ctcatctctc tctcttaata gagacagtaa tttcaattaa atcttgctta attaaggata 2340 atgttgttgt taatattaat agagagatga ttaaggacga tatatcttaa tactttatat 2400 ttttatgaaa cgacatccca tgttgcgttt taaatcggag acaatcaaag tctctgatat 2460 ccaatatatc ggagccaata tataggtctc ccaatatatt ggtacgggag tcagcagcga 2520 cagttttgtt aaacttcgag ggcaagttgt gtcttttcac tattgaacaa aggaaaggac 2580 aaggaaaagc taggggtatt tttggtattt cactttataa gggcaaaatg gtaaataaca 2640 caccgctgct gcacgacccc attatt 2666 //