ID FJ685621; SV 1; circular; genomic DNA; STD; VRL; 2784 BP. XX AC FJ685621; XX DT 08-MAR-2009 (Rel. 100, Created) DT 11-APR-2025 (Rel. 144, Last updated, Version 4) XX DE Tomato leaf curl Nigeria virus, complete sequence. XX KW . XX OS Tomato leaf curl Nigeria virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2784 RX PUBMED; 22057578. RA Kon T., Gilbertson R.L.; RT "Two genetically related begomoviruses causing tomato leaf curl disease in RT Togo and Nigeria differ in virulence and host range but do not require a RT betasatellite for induction of disease symptoms"; RL Arch. Virol. 157(1):107-120(2012). XX RN [2] RP 1-2784 RA Kon T., Rojas M.R., Gilbertson R.L.; RT "Molecular characterization of tomato-infecting Begomovirus from Nigeria"; RL Unpublished. XX RN [3] RP 1-2784 RA Kon T., Rojas M.R., Gilbertson R.L.; RT ; RL Submitted (30-JAN-2009) to the INSDC. RL Department of Plant Pathology, University of California-Davis, One Shields RL Avenue, Davis, CA 95616, USA XX DR MD5; 4aa2648042efa3af270509261ae585a5. XX FH Key Location/Qualifiers FH FT source 1..2784 FT /organism="Tomato leaf curl Nigeria virus" FT /host="tomato" FT /mol_type="genomic DNA" FT /geo_loc_name="Nigeria" FT /collection_date="2006" FT /db_xref="taxon:1513530" FT gene 176..526 FT /gene="V1" FT CDS 176..526 FT /codon_start=1 FT /gene="V1" FT /product="V1" FT /protein_id="ACN43233.1" FT /translation="MWDPLLNEFPDSVHGFRCMLGIKYLQLLEEEYEPNTLGHDLIRDL FT ISVIRAKNYVEATRRYNNFHARLEGASSSELRQPLHQPCCCPHCPRHKQASFVDLSAHV FT SKAQNVPDVQNP" FT gene 336..1109 FT /gene="V2" FT CDS 336..1109 FT /codon_start=1 FT /gene="V2" FT /product="coat protein" FT /protein_id="ACN43234.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPTVRGISKRRSW FT TYRPMYRKPRMYRMFRTPDIPRGCEGPCKVQSYEQRDDVKHVGIVRCVSDVTRGSGLTH FT RVGKRFCIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPYGSPSDFGQIFNMFDNE FT PSTATIKNDLRDRYQVLRKFSATVIGGPSGCKEQALVKRFFKVNNHVVYNHQEEAKYAN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1106..1510) FT /gene="C3" FT CDS complement(1106..1510) FT /codon_start=1 FT /gene="C3" FT /product="C3" FT /protein_id="ACN43238.1" FT /translation="MDSRTGELITAHQARNGVFIWEIQNPLYFKITNHDERPFNYQHDI FT ITVQIRFNHNLRKALGIHKCFLNFKVWTSLRPQTGRFLRVFRVQVLKYLDNLGVISINT FT IIRAVDHVLYNVLVNTIDVVETHEIKFNIY" FT gene complement(1251..1658) FT /gene="C2" FT CDS complement(1251..1658) FT /codon_start=1 FT /gene="C2" FT /product="C2" FT /protein_id="ACN43237.1" FT /translation="MRPSSPSTSHSTQVPIKVQHRIAKKKVVRRKRVDLECGCSYFIHI FT NCSNHGFTHRGTHHCASSSEWRFYLGDTKSPVFQDNQPRRETVQLPTRHNHSTNQVQPQ FT PAEGVGDSQVFSELQSLDELTPSDWSFLKGI" FT gene complement(1567..2646) FT /gene="C1" FT CDS complement(1567..2646) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /protein_id="ACN43235.1" FT /translation="MAPPKKFRINSKNYFLTFPKCSISKEEALEQLLKLETPTNKKYIK FT ICRELHEDGQPHLHVLLQFEGKYNCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFH FT NLNNNLDRIFQEPPAPYVSPFLCSSFNQVPEELEEWVSENVSDAAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNASLKAWAIKNATFVTLNEPL FT YSSAHQSPAPHREEESSEA" FT gene complement(2187..2489) FT /gene="C4" FT CDS complement(2187..2489) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /protein_id="ACN43236.1" FT /translation="MASLIFTCFCSSKANTTAKIRDSSTWCPQPGQHISIQTYRELNPA FT PTSSPTSTRMEIHSNGESSRSMGDLQEEGNRQPMTLTPQRLTQEVRQRLLGLYGN" XX SQ Sequence 2784 BP; 746 A; 586 C; 613 G; 839 T; 0 other; accggtgggc gcgaaaaaaa aaaaagtggt ccccttacac gctcgaaagc aaaagtaaag 60 aaatcagtgg tccccgtcca ctaataaatg tcagccaatc agaatgaagc ctgaaagctt 120 tcttatttag attttgtttt tatatacttc ctcgccaagt agttattatt gcaacatgtg 180 ggatccatta ttgaacgagt tcccagactc ggttcatggt tttcgttgta tgctgggtat 240 aaaatatcta cagcttttag aagaggagta cgagcccaat actttgggcc acgatttaat 300 tagagatctc atatctgtca ttcgggctaa gaattatgtc gaagcgaccc ggcgatataa 360 taatttccac gcccgtctcg aaggtgcgtc gtcgtctgaa cttcgacagc ccctacacca 420 gccgtgctgc tgtccccact gtccgaggca taagcaagcg tcgttcgtgg acttatcggc 480 ccatgtatcg aaagcccaga atgtaccgga tgttcagaac ccctgacatc cctcgtggat 540 gtgaaggccc atgtaaggtc cagtcgtatg agcagagaga tgatgtcaag cacgtgggta 600 tagttcgatg tgttagtgat gtgacccgtg ggtccggtct gactcataga gtagggaaga 660 gattttgcat taagtctatt tatatattag gtaaagtttg gatggacgaa aacatcaaga 720 agcagaatca tactaacaat gttatgtttt tcttagttcg tgatcgtagg ccttatggca 780 gcccaagtga ttttggacag atttttaaca tgtttgacaa cgagcccagt acagccacaa 840 tcaagaatga tctcagagac cgttatcaag tgctgcgtaa attcagtgct actgttattg 900 gtggtccctc tggatgcaag gaacaggctt tagtgaagag attttttaaa gtaaacaatc 960 atgtcgttta taatcatcag gaggaggcta aatatgccaa ccatactgag aatgctttgt 1020 tgttgtatat ggcttgtact catgcctcta atccagtgta tgctactctg aaaatacgca 1080 tctatttcta cgatgcagtt acgaattaat aaatattaaa ttttatttca tgtgtttcga 1140 caacgtcgat tgtatttaca agaacgttat acagtacatg atcaacagct ctaataattg 1200 tattaattga aattacaccc aaattatcta aatactttaa cacttgaacc ctaaataccc 1260 ttaagaaacg accagtctga gggcgtaagc tcgtccagac tttgaagttc agaaaacact 1320 tgtgaatccc caacgccttc cgcaggttgt ggttgaacct gatttgtact gtgattatgt 1380 cgtgttggta gttgaacggt ctctcgtcgt ggttggttat cttgaaatac aggggatttt 1440 gtatctccca gataaaaacg ccattccgag cttgatgcgc agtgatgagt tcccctgtgc 1500 gtgaatccat ggttactgca gttaatatgt atgaagtacg agcacccgca ctctaagtcc 1560 actctcttac gcctcactac tttcttcttc gcgatgcggt gctggacttt gatgggcact 1620 tgagtagagt ggctcgttga gggtgacgaa ggtcgcattt tttatagccc aggcttttag 1680 tgatgcattc ttttcctcgt ctagatactc tttatatgat gatgttggac ctggattgca 1740 gaggaagata gtgggaattc cacctttaat ttgaatgggc ttcccgtact tggtgttgct 1800 ttgccagtct ctttgggccc ccataaattc tttgaagtgt ttgaggtaat ggggatcgac 1860 gtcatcaatg acgttatacc aagcatcatt tgaatacacc tttgggctaa gatcaagatg 1920 cccacacaag taattgtgtg gacctaatga cctagcccac atcgtcttgc cggtacgact 1980 atcaccctca ataacaatac tattcggtct ccatggccgc gcagcggcat cgctcacatt 2040 ctcagagacc cactcttcaa gttcttccgg aacttgatta aaagaagaac ataaaaaagg 2100 agaaacataa ggagccggag gctcctgaaa aattctatct aaattattat ttaaattatg 2160 aaattgtaat acaaaatctt tgggagctaa ttcccgtata accctaagag cctctgcctt 2220 acttcctgcg ttaagcgctg cggcgtaagc gtcattggct gtctgttgcc ctcctcttgc 2280 agatctccca tcgatctgga actctcccca ttcgagtgta tctccatcct tgtcgatgta 2340 ggacttgacg tcggagctgg atttagctcc ctgtatgttt ggatggaaat gtgctgacct 2400 ggttggggac accaggtcga agaatctctg attttggcag ttgtatttgc cttcgaactg 2460 cagaagcacg tgaagatgag gctggccatc ctcgtgaagt tctctgcaga tcttgatata 2520 ttttttattc gttggggttt ctagttttag aagttgctct agggcttctt ctttagaaat 2580 agagcatttt gggaaagtga ggaagtagtt tttggaattt attctaaatt tctttggagg 2640 agccatatgg tcaactagca ccaattgact gccctggata cttctcccct gttaattggg 2700 gttctatata tacttagcac caaatggcat aatggtaata ctcccaaaaa atttgaaccc 2760 ccaaagcgcc caccgaataa tatt 2784 //