Dbfetch
ID FJ665629; SV 1; circular; genomic DNA; STD; VRL; 2746 BP. XX AC FJ665629; XX DT 22-APR-2009 (Rel. 100, Created) DT 22-APR-2009 (Rel. 100, Last updated, Version 1) XX DE Eragrostis curvula streak virus isolate ECSV-ZA-Gre2-g256-2007, complete DE genome. XX KW . XX OS Eragrostis curvula streak virus OC Viruses; Geminiviridae; Eragrovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2746 RX PUBMED; 19321000. RA Varsani A., Shepherd D.N., Dent K., Monjane A.L., Rybicki E.P., RA Martin D.P.; RT "A highly divergent South African geminivirus species illuminates the RT ancient evolutionary history of this family"; RL Virol J 6:36-36(2009). XX RN [2] RP 1-2746 RA Varsani A., Shepherd D.N., Dent K., Monjane A.L., Rybicki E.P., RA Martin D.P.; RT ; RL Submitted (27-JAN-2009) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Rondebosch, Cape Town, RL WP 7701, South Africa XX DR MD5; 29b8344b3ad8ae40dc149c74ef0ecb64. DR EuropePMC; PMC2666655; 19321000. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Eragrostis curvula streak virus" FT /host="Eragrostis curvula" FT /isolate="ECSV-ZA-Gre2-g256-2007" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="29.16 S 30.43 E" FT /collection_date="Dec-2007" FT /db_xref="taxon:638358" FT CDS 67..336 FT /codon_start=1 FT /product="movement protein" FT /db_xref="UniProtKB/TrEMBL:C3UV52" FT /protein_id="ACO88012.1" FT /translation="MSGPPPCDRTEPVQTIPLLLCHGRRSLPLCHAEVLPPQDLGQIRY FT LVKRFKARVLIRTIAEQYSGSSLADKLELIWTFCDTLQHEAEEE" FT CDS 317..1093 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:C3UV53" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:C3UV53" FT /protein_id="ACO88013.1" FT /translation="MKRKRNEAVPAGRRYPQRRRMYYRPRKPFFPRPVYTRSSSVKRPA FT LQISGLVYGNSSTGAVKINTGALSLVTAFKAGTAEECRHSNQTIVKSFDISGTLYVQSP FT TSSNCGPVVVYFWLIYDSEPRQAIPNITDVFSMPWTSVPSSWRISRSSSHRFVVKRKWH FT YELMSDGVLPQSNTKVQTHNPVSRNMMDFSKYINNLGVPTEWMSTGDGTIGDIKKGALY FT LAAACRQGIVGDATKITVEVEFIGQSRTYFKSIGYQ" FT CDS complement(1540..2643) FT /codon_start=1 FT /product="replication associated protein" FT /db_xref="GOA:C3UV54" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C3UV54" FT /protein_id="ACO88014.1" FT /translation="MASSSHRFRIQGRAFFLTYSQCPREPKDVGEFLTSHSTLASHVVY FT VRVQQEKHQDGNNHLHAIVCTSERRDIRDPRIFDFGEFHPKIETCRSVSKSLKYIQKEA FT GSFYEHGTVPCDKRLTGRKRKAEQDEWWHQAVNSGTIEEALQLVKDNEPRTFWLQHHNL FT VTNARRIWSEVRADFVPKYSESSFSVPRVLSDWVANNLRADPLPDRPLSLIIEGDSRTG FT KTAWARSLGSHNYLSGHLDLNGAVFDNEASYNVIDDVNPKYLKHWKEFLGAQKDWQSNL FT KYGKPVLVKGGKPAIVLCNSDQSYKSFLDCEENQHLRSWTSKNAVFVDIQDALFSGVSL FT TLREQTREDDPESPMWASDSDPGDQAV" XX SQ Sequence 2746 BP; 653 A; 684 C; 671 G; 738 T; 0 other; taagattccc gctccccccc cccgcgagcg cgtagcgcga gcccgccggc ccatttcgaa 60 ataaagatgt caggcccacc tccctgcgat cgcaccgagc cagtacagac aatacctttg 120 ttgctttgcc atggccggcg cagtctgccg ctttgtcatg cggaggtcct tccaccacaa 180 gacttaggtc agatccgtta cttggtaaag cgattcaagg cccgtgtcct tattaggacg 240 attgcggaac aatacagcgg cagttcctta gcagataagc ttgagcttat ctggacgttc 300 tgtgatacct tacaacatga agcggaagag gaatgaagca gttcctgccg gtcgccgtta 360 tcctcaacgg cgtcgtatgt actaccgtcc tcgtaagcct ttctttcccc gcccagtgta 420 tacaaggtcc tccagtgtta agcgtcctgc cctacagatt agtggtctcg tttacgggaa 480 ctcgagtacg ggagccgtta aaattaacac tggagcactt agccttgtca ctgcatttaa 540 ggcggggact gcagaagagt gtagacactc taatcaaaca attgtgaagt cctttgacat 600 tagtggtact ctttacgttc agtctcctac cagttcaaac tgtggtcctg ttgttgttta 660 cttctggcta atctacgatt cagaacccag acaggctatc ccgaacataa cagatgtgtt 720 ctccatgcct tggactagtg tgccgtcaag ttggcgtata tcacggtcct cttctcaccg 780 ttttgttgta aagaggaagt ggcattacga attgatgtca gatggtgttc ttccccagag 840 taacacgaaa gtgcagactc ataatcccgt ttccaggaac atgatggact tctctaagta 900 catcaataat cttggtgtcc ccacggaatg gatgagtact ggagatggaa ccattggtga 960 tatcaagaag ggcgcgttgt acctcgccgc cgcctgccga cagggaattg ttggagatgc 1020 aaccaagatt actgtagaag tagagtttat cgggcagtct cgtacttact tcaagagcat 1080 tggttaccag tgatgtaatt tgcgtgcatt tgcactaata aagtaattaa tttacatgtc 1140 gttgtcatga gccgggaggc gaggtccgtc ggggccgaag gcccgacggt tcctctgagg 1200 cgcgaagcgc gaagcgcgag tgccgtggaa ccatatttgc cgttaacatt tccttagttt 1260 aacgcccctg cgaggcggcg ggcgaagccc gacgacatgc gcgcagcgcc ttacacaaga 1320 gtggaacact aacaagaatt gatactctca tcccatagtg cctcattagg gcccatgagg 1380 ttacagttac aatccacaca cttgtctaaa atacattgag cgctgtggcg ctccgagaac 1440 tcaaaataag tggtaggtat gttacatgcg tcttcgtact cctgctctgc cctggacttg 1500 aagtgcggca ttggcatgaa ctgatgtaca cggccacagt tacacggctt ggtcacctgg 1560 atcactatct gaagcccaca ttggagattc agggtcatct tctctggttt gctcccgcag 1620 agtaagtgag actccgctaa agagagcatc ttggatatcc acgaagaccg catttttgct 1680 agtccacgaa cgaaggtgtt ggttctcttc acaatcaagg aaggatttat aggactggtc 1740 cgagttacag agcacgattg ctggtttacc acctttaacc agaaccggtt tcccatattt 1800 caggttactt tgccagtctt tctgagctcc tagaaactcc ttccaatgct ttagatattt 1860 agggtttacg tcatcaatga cgttgtaact tgcctcgttg tcgaatacgg ctccgttgag 1920 gtccagatgt ccgctgagat agttgtgact ccccaatgat ctagcccaag ccgtttttcc 1980 tgtacgtgaa tcaccttcaa ttatcaaaga taatggtcta tccggtaaag gatctgccct 2040 taagttattt gcgacccagt cagataagac tcgcggtaca gaaaaactgc tctccgaata 2100 ttttggaaca aaatctgctc gtacctcaga ccatatgcgc ctggcgttgg tgaccaggtt 2160 atggtgttgc agccagaatg tacgcggctc gttgtctttc acaagctgca gagcctcctc 2220 gattgtacct gaattcaccg cttggtgcca ccattcgtct tgctcagcct ttctcttgcg 2280 tcccgtcagc ctcttgtcac atggtacagt accatgttcg tagaaagacc cagcttcttt 2340 ctgtatgtac ttcagactct tggatacgga acgacaagtc tcaatcttcg gatggaattc 2400 cccgaagtcg aatatacgag ggtctcgtat atctctacgc tcacttgtac atactatagc 2460 atgaagatgg ttgttaccat cttggtgctt ttcctgttgt acgcgtacgt acacgacgtg 2520 gctagcaaga gttgagtggg aagtgaggaa ctctcccaca tccttaggct ctcttgggca 2580 ttgtgagtaa gtgaggaaga atgccctccc ttggatccta aatctatggc tggatgaagc 2640 catcctcaaa ctagtttggt caaaccaaaa cccctgggtc aattgtgagg aatgaggatg 2700 gagggtgtta tatagcctct ggggcctctg gggggggggg agcgtc 2746 //