ID FJ654658; SV 1; linear; genomic RNA; STD; VRL; 6412 BP. XX AC FJ654658; XX DT 08-MAR-2009 (Rel. 100, Created) DT 08-MAR-2009 (Rel. 100, Last updated, Version 1) XX DE Cucumber green mottle mosaic virus isolate C, complete genome. XX KW . XX OS Cucumber green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6412 RA Deng T.-C., Tsai C.-H., Liao J.-Y., Cheng Y.-H.; RT "A case study of seed health testing for Cucumber green mottle mosaic virus RT in bottle gourd (Lagenaria siceraria L.)"; RL Unpublished. XX RN [2] RP 1-6412 RA Deng T.-C., Tsai C.-H., Liao J.-Y., Cheng Y.-H.; RT ; RL Submitted (22-JAN-2009) to the INSDC. RL Plant Pathology, Agricultural Research Institute, 189 Chung-Cheng Road, RL Taichung 41301, Taiwan XX DR MD5; 0ea540dd11ce6424d5d5b7fc94b0be30. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6412 FT /organism="Cucumber green mottle mosaic virus" FT /host="Cucumis sativus L." FT /isolate="C" FT /mol_type="genomic RNA" FT /country="Taiwan" FT /collection_date="1985" FT /db_xref="taxon:12235" FT CDS 62..5008 FT /codon_start=1 FT /transl_except=(pos:3494..3496,aa:OTHER) FT /product="RNA replicase" FT /note="186K protein readthrough product" FT /db_xref="GOA:C0L2T0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C0L2T0" FT /protein_id="ACN49131.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDSSPCAVTRSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFSEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWSGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTKXQLMQNSLYVHRNIFLPVSKTG FT FYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQPCRLTLSNLDPVPALIKNEAQ FT NFLIPVLRTACERPRIPGLLENLVAMIKRNMNTPDLAGTVDITNMSISIVDNFFSSFVR FT DEVLLDHLDCVRASSIQSFSDWFSCQPTSAVGQLANFNFIDLPAFDTYMHMIKRQPKSR FT LDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTKFLSMVDSSKFFFYTRKKPEDLQE FT FFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMAIWEKLGLDDILAWMWSMGHKRTIL FT QDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMLPLDKCFKASFCGDDSLIYLPK FT GLEYPDIQATANLVWNFEAKLFRKKYGYFCGKYIIHHANGCIVYPDPLKLISKLGNKSL FT VGYEHVEEFRISLLDVAHSLFNGAYFHLLDDAIHELFPNAGGCSFVINCLCKYLSDKRL FT FRSLYIDVSK" FT CDS 62..3496 FT /codon_start=1 FT /product="RNA replicase" FT /note="129K protein" FT /db_xref="GOA:C0L2T1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C0L2T1" FT /protein_id="ACN49132.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDSSPCAVTRSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFSEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWSGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTK" FT CDS 4995..5789 FT /codon_start=1 FT /product="movement protein" FT /note="29K protein" FT /db_xref="GOA:Q9WMZ9" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q9WMZ9" FT /protein_id="ACN49133.1" FT /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSVV FT KAQSYESLVPVKLLRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHSVA FT EGTICKFSAPATVREFSVRFIPNYSVVAADALRDPWSLFVRLSNVGIKDGFHPLTLEVA FT CLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARDPSYR FT SRSQSVGGRGKRHSKPPNRRLDSASEESSSVSFEDGLQSDHT" FT CDS 5764..6249 FT /codon_start=1 FT /product="coat protein" FT /note="17.4K protein" FT /db_xref="GOA:Q77G05" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77G05" FT /protein_id="ACN49134.1" FT /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSF FT RESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPT FT TAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSKA" XX SQ Sequence 6412 BP; 1646 A; 1239 C; 1526 G; 2001 T; 0 other; gttttaattt ttataattaa acaaacaaca acaacaacaa caaacaattt ttaaaacaac 60 aatggcaaac attaatgaac aaatcaacaa ccaacgtgac gccgcggcta gcgggagaaa 120 caatctcgtt agccaattgg cgtcaaaaag ggtgtatgac gaggctgttc gctcgttgga 180 tcatcaagac agacgcccga aaatgaactt ttctcgtgtg gtcagcacag agcacaccag 240 gcttgtaact gatgcgtatc cggagttttc gattagcttt accgccacca agaactctgt 300 acactccctt gcgggtggtc tgaggcttct tgaattggaa tatatgatga tgcaagtgcc 360 ctacggctca ccttgttatg acatcggcgg taactatacg cagcacttgt tcaaaggtag 420 atcatatgtg cattgctgca atccgtgcct agatcttaaa gatgttgcga ggaatgtgat 480 gtacaacgat atgatcacgc aacatgtaca gaggcacaag ggatctggcg ggtgcagacc 540 tcttccaact ttccagatag atgcattcag gaggtacgat agttctccct gtgcggtcac 600 ccgttcagac gttttccaag aatgttccta tgattttggg agtggtaggg ataatcatgc 660 agtctcgttg cattcaatct acgatatccc ttattcttcg atcggacctg ctcttcatag 720 gaagaatgtg cgagtttgtt atgcagcctt tcatttctcg gaggcattgc ttttaggttc 780 gcctgtaggt aatttaaata gtattggggc tcagtttagg gtcgatggtg atgatgtgca 840 ttttcttttt agtgaagagt ctactttgca ttatactcat agtttagaaa atatcaagtt 900 aatcgtgatg cgtacttact ttcctgctga tgataggttt gtatatatta aggagttcat 960 ggttaagcgt gtggatactt ttttctttag gttggtcaga gcagatacac acatgcttca 1020 taaatctgtg gggcactatt cgaaatcgaa gtctgagtac ttcgcgctga atacccctcc 1080 gatcttccaa gataaagcca cgttttctgt gtggttttct gaagcgaagc gcaaggtgtt 1140 gatacccaag tttgaacttt cgagattcct ttctgggaat gtgaaaatct ctaggatgct 1200 tgtcgatgct gatttcgtcc ataccattat taatcacatt agcacgtatg ataacaaggc 1260 tttagtgtgg aagaatgttc agtcctttgt ggaatccata cgttcaagag taattgtaaa 1320 cggagtttcc gtaaaatctg agtggaacgt accggttgat cagctcactg atatctcgtt 1380 ctcgatattc cttctcgtga aggttaggaa ggtacagatc gagttaatgt ctgataaagt 1440 tgtaatcgag gcgaggggtt tgcttcggag gttcgcagac agtcttaaat ctgccgtaga 1500 aggactaggt gattgcgtct atgatgctct agttcaaacc ggctggtttg acacctctag 1560 cgacgaactg aaagtattgc tgcctgaacc gtttatgacc ttttcggatt atcttgaagg 1620 gatgtacgag gcagatgcaa agatcgagag agagagtgtc tctgagttgc tcgcttccgg 1680 tgatgatttg ttcaagaaaa tcgatgagat aagaaacaat tacagtggag tcgaatttga 1740 tgtagagaaa ttccaagaat tttgcaagga actgaatgtt aatcctatgc taattggcca 1800 tgttatcgaa gctatttttt cgcagaaggc tggggtaaca gtaacgggtc tgggcacgct 1860 ctctcctgag atgggcgctt ctgttgcgtt atccagtacc tctgtagata catgtgaaga 1920 tatggatgtg actgaagata tggaggatat agtgttgatg gcggacaaga gtcattctta 1980 catgtcccct gaaatggcga gatgggctga tgttaaatat ggcaacaata aaggggctct 2040 agtcgagtac aaagtcggaa cctcgatgac tttacctgcc acctgggcag agaaaggtaa 2100 ggctgtctta ccgttgtcgg ggatctgtgt gaggaaaccc caattttcga agccgcttga 2160 tgaggaagat gacttgaggt tatcaaacat gaatttcttt aaggtgagcg atctaaagtt 2220 gaagaagact atcactccag tcgtttacac tgggaccatt cgagagaggc aaatgaagaa 2280 ttatattgat tacttatcgg cctctcttgg ttccacgctg ggtaatctgg agagaatcgt 2340 gcggagtgat tggagtggta ctgaggagag tatgcaaacg ttcgggttgt atgactgcga 2400 aaagtgcaag tggttattgt tgccagccga gaagaagcac gcatgggccg tggttctggc 2460 aagtgatgat accactcgca taatcttcct ttcatatgac gaatctggtt ctcctataat 2520 tgataagaaa aactggaagc gatttgctgt ctgttccgag accaaagtct atagtgtaat 2580 tcgtagttta gaggttctaa ataaggaagc aatagtcgac cccggggttc acataacatt 2640 agttgacgga gtgccgggtt gtggaaagac cgccgagatt atagcgaggg tcaattggaa 2700 aactgatcta gtattgactc ccgggaggga ggcggctgct atgattaggc gaagagcgtg 2760 cgccctgcac aagtcacctg tggcaaccag tgacaacgtc agaactttcg attcttttgt 2820 gatgaatagg aaaatcttca agtttgacgc tgtctatgtt gacgagggtc tgatggtcca 2880 tacgggatta cttaattttg cgttaaagat ctcaggttgt aaaaaagcct tcgtctttgg 2940 tgatgctaag caaatcccgt ttataaacag agtcatgaat tttgattatc ccaaggagtt 3000 gagaactcta atagtcgata atgtagagcg taggtatgtc acccataggt gtcctagaga 3060 tgtcactagt tttcttaata ctatctataa agccgctgtc gctactacta gtccggttgt 3120 acattctgtg aaggcaatta aagtgtcagg ggccggtatt ctgaggcctg agttgacaaa 3180 gatcaaagga aagataataa cgtttactca atctgataag cagtccttga tcaagagtgg 3240 gtacaatgat gtgaatactg tgcatgaaat tcagggagaa acctttgagg agacggcagt 3300 tgtgcgtgcc accccgactc caataggttt gattgcccgt gattcaccac atgtactagt 3360 ggccttaact aggcacacta aggcaatggt atattatact gttgtattcg atgcagttac 3420 aagtataata gcggatgtgg aaaaggtcga tcagtcgatc ttgaccatgt ttgctaccac 3480 tgtgcctacc aaatagcaat taatgcagaa ctcgctgtat gtccatcgta atattttcct 3540 ccctgttagt aaaacggggt tttatacaga catgcaggag ttctacgata gatgccttcc 3600 tgggaattcc ttcgtgctga atgatttcga tgccgtaacc atgcggttga gggacaacga 3660 atttaactta caaccttgta ggctaacctt gagtaattta gatccggtac ccgctttgat 3720 taagaatgaa gcgcagaatt ttctgatccc cgttttgcgt acggcctgtg aaaggccgcg 3780 cattccgggt cttcttgaga atcttgtggc tatgataaag aggaatatga atactcctga 3840 tttagctggg accgtagata taactaacat gtcgatttct atagtagata acttcttttc 3900 ttcttttgtt agggacgagg ttttgcttga tcacttagat tgtgttaggg ctagttccat 3960 tcaaagcttt tctgattggt tttcgtgtca gccaacctca gcggttggcc agttagctaa 4020 tttcaatttc atagatttgc ctgcctttga tacttatatg catatgatta agaggcaacc 4080 caagagtcgg ttagatactt cgattcagtc tgaatatccg gccttgcaaa ctattgttta 4140 tcaccctaaa gtggtaaatg cagtttttgg tccggttttc aagtatttga ccaccaagtt 4200 tcttagtatg gtagatagtt ctaagttttt cttttacact agaaaaaaac cagaagatct 4260 gcaggaattt ttctcagatc tctcttccca ttctgattat gagattcttg agcttgatgt 4320 ttctaaatat gacaagtcgc aatccgattt ccatttctct attgagatgg caatttggga 4380 aaaattgggg ctggacgata ttttggcttg gatgtggtct atgggtcaca aaagaactat 4440 actgcaagat ttccaagccg ggataaagac gctcatttac tatcaacgga agtctggtga 4500 tgtaactact tttataggta atacctttat tatcgcagcg tgtgtagcta gtatgttgcc 4560 gttagataag tgttttaaag ctagtttttg tggtgatgat tcgctgatct accttcctaa 4620 gggcttggag tatcctgata tacaggctac tgccaacctt gtttggaatt ttgaggcgaa 4680 acttttccga aagaagtatg gttacttctg cgggaagtat ataattcacc atgccaacgg 4740 ctgtattgtt taccctgacc ctttaaaatt aattagtaaa ttaggtaata agagtcttgt 4800 agggtatgag catgttgagg agtttcgtat atctctcctc gacgttgctc atagtttgtt 4860 taatggtgct tatttccatt tactcgacga tgcaatccac gaattatttc ctaatgctgg 4920 gggttgcagt tttgtaatta attgtttgtg taagtatttg agtgataagc gccttttccg 4980 tagtctttac atagatgtct ctaagtaagg tgtcagtcga gaactcgttg aaacctgaga 5040 agtttgtcaa aatctcttgg gtcgataagt tgctccctaa ctatttttcc attcttaagt 5100 atttatctat aactgacttt agtgtagtta aagctcagag ctatgaatcc ctcgtgcctg 5160 tcaagttgtt gcgtggtgtt gatcttacaa aacaccttta tgtcacattg ttgggcgttg 5220 tggtttctgg tgtatggaac gtaccggaat cctgtagggg tggtgctact gttgctctgg 5280 ttgacacaag gatgcattct gttgcagagg gaactatatg caaattttca gctcccgcca 5340 ccgtccgcga attctctgtt aggttcatac ctaattattc tgtcgtggct gcggatgccc 5400 ttcgcgatcc ttggtcttta tttgtgagac tctctaatgt gggtattaaa gatggtttcc 5460 atcctttgac tttagaggtc gcttgtttag tcgctacaac taactctatt atcaaaaagg 5520 gtcttagagc ttctgtagtc gagtctgtcg tctcttccga tcagtctatt gtcctagatt 5580 ctttatccga gaaagttgaa cctttctttg acaaagttcc tatttcagcg gctgtaatgg 5640 caagagatcc cagttatagg tctaggtcgc agtctgtcgg tggtcgtggt aagcggcatt 5700 ctaaacctcc aaatcggagg ttggactctg cttctgaaga gtccagttct gtttcttttg 5760 aagatggctt acaatccgat cacacctagc aaacttattg cgtttagtgc ttcttatgtt 5820 cccgttagga ctttacttaa ttttctagtt gcctcacaag gtaccgcttt ccagactcaa 5880 gcgggaagag attctttccg cgagtccctg tctgcgttac cctcgtctgt cgtagatatt 5940 aattccagat tcccagatgc gggtttttac gctttcctca acggtcctgt gttgaggcct 6000 atcttcgttt cgcttctcag ctccacggat acgcgtaata gggtcattga ggttgtagat 6060 cctagcaatc ctacgactgc tgagtcgctt aacgctgtaa agcgtactga tgacgcgtct 6120 acagccgcta gggctgagat agataattta atagagtcta tttctaaggg ttttgatgtt 6180 tacgataggg cttcatttga agccgcgttt tcggtagtct ggtcagaggc taccacctcg 6240 aaagcttagt ttcgagggtc ttctgatggt ggtgcacacc aaagtgcata gtgctttccc 6300 gttcacttaa atcgaacggt ttgctcattg gtttgcggaa acctctcacg tgtgacgttg 6360 aagtttctat gggcagtaat tctgcaaggg gttcgaatcc cccctttccc cg 6412 //