ID FJ646611; SV 1; circular; genomic DNA; STD; VRL; 2786 BP. XX AC FJ646611; XX DT 23-FEB-2009 (Rel. 99, Created) DT 23-FEB-2009 (Rel. 99, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate AH1, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2786 RA Yu W.G., Zhao T.M., Yang M.L.; RT "Detection and Sequence Analysis of Whitefly-transmitted Geminivirus in RT Tomato from Anhui and Shandong provinces"; RL Unpublished. XX RN [2] RP 1-2786 RA Yu G.W., Zhao M.T., Yang L.M.; RT ; RL Submitted (19-JAN-2009) to the INSDC. RL Vegetable Crops, Jiangsu Academy of Agricultural Sciences, 50 Zhongling RL Street, Nanjing, Jiangsu, China XX DR MD5; 1c99f81cb7ff0bd1bbddc7cd36a4cff8. XX FH Key Location/Qualifiers FH FT source 1..2786 FT /organism="Tomato yellow leaf curl virus" FT /host="Lycopersicon esculentum" FT /isolate="AH1" FT /mol_type="genomic DNA" FT /country="China" FT /collection_date="Nov-2008" FT /db_xref="taxon:10832" FT gene 153..503 FT /gene="AV2" FT CDS 153..503 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2EI17" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2EI17" FT /protein_id="ACN12990.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 313..1089 FT /gene="AV1" FT CDS 313..1089 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q17UU2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q17UU2" FT /protein_id="ACN12989.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1086..1490) FT /gene="AC3" FT CDS complement(1086..1490) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:C0KYD1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C0KYD1" FT /protein_id="ACN12991.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNNDI FT ISIQIRFNHNIRKALGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDHVLYDVLENTINVTATHDIKYKFY" FT gene complement(1231..1638) FT /gene="AC2" FT CDS complement(1231..1638) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:A6H4V7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6H4V7" FT /protein_id="ACN12992.1" FT /translation="MQSSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEQRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1547..2620) FT /gene="AC1" FT CDS complement(1547..2620) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:C0KYD3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C0KYD3" FT /protein_id="ACN12993.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDSRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYISPFLSSSFNQVPDELDEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2176..2469) FT /gene="AC4" FT CDS complement(2176..2469) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="GOA:Q17UU4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q17UU4" FT /protein_id="ACN12994.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2786 BP; 759 A; 531 C; 608 G; 888 T; 0 other; aatttttacc ttggccgcgc cttctctttt tatgtggtct ccacgagggt tccacatacg 60 tcactgtcaa ccaatcaaat tgcatcctca aacgttagat aagtgttcat ttgtctttat 120 atacttggtc cccaagtagt ctgtcttgca atatgtggga tccacttcta aatgaatttc 180 ctgaatctgt tcacggattt cgttgtatgt tagctattaa atatttgcag tccgttgagg 240 aaacttacga gcccaataca ttgggccacg atttaattag ggatcttata tctgttgtaa 300 gggcccgtga ctatgtcgaa gcgaccaggc gatataatca tttccacgcc cgcctcgaag 360 gttcgccgaa ggctgaactt cgacagccca tacagcagcc gtgctgctgt ccccattgtc 420 caaggcacaa acaagcgacg atcatggacg tacaggccca tgtaccggaa gcccagaata 480 tacagaatgt atcgaagccc tgatgttcct cgtggatgtg aaggcccatg taaagtccag 540 tcttatgagc aacgggatga tattaagcat actggtattg ttcgttgtgt tagtgatgtt 600 actcgtggat ctggaattac tcacagagtg ggtaagaggt tctgtgttaa atcgatatat 660 tttttaggta aagtctggat ggatgaaaat atcaagaagc agaatcacac taatcaggtc 720 atgttcttct tggttcgtga tagaaggccc tatggaaaca gcccaatgga ttttggacag 780 gtttttaata tgttcgataa tgagcccagt accgcaactg tgaagaatga tttgcgggat 840 aggtttcaag tgatgaggaa atttcatgct acagttattg gtgggccctc tggaatgaag 900 gaacaggcat tagttaagag attttttaga attaacagtc atgtaactta taatcatcag 960 gaggcagcca agtatgagaa ccatactgaa aacgccttgt tattgtatat ggcatgtacg 1020 catgcctcta atccagtgta tgcaactatg aaaatacgca tctatttcta tgattcaata 1080 tcaaattaat aaaatttata ttttatatca tgagttgctg ttacatttat tgtgttttca 1140 agtacatcat acaatacatg atcaactgct ctgattacat tgttaattga aattacacca 1200 agactatata aatacttaag aacttgatat ctaaatactc ttaagaaacg accagtctga 1260 ggctgtaatg tcgtccaaat tcggaagttg agaaaacatt tgtgaatccc caatgccttc 1320 ctgatgttgt ggttgaatct tatctgaatg gaaatgatgt cgttgttcat tagaaatggc 1380 ctctggctgt gttctgttat cttgaaatag aggggattgt ttatctccca gataaaaacg 1440 ccattctctg cttgaggagc agtgatgagt tcccctgtgc gtgaatccat gattgttgca 1500 gttgatgtgg aggtagtatg agcagccaca gtctaggtct acacgcttac gccttattgg 1560 tttcttcttg gctatcttgt gttggacctt gattgatact tgcgaacagt ggctcgtaga 1620 gggtgacgaa gattgcattc ttgagagccc aatttttcaa ggatatgttt ttttcttcgt 1680 ctagatattc cctatatgag gaggtaggtc ctggattgca gaggaagata gtgggaattc 1740 cccctttaat ttgaatgggc ttcccgtact ttgtgttgct ttgccagtcc ctctgggccc 1800 ccatgaattc cttgaagtgc tttaaataat gcgggtctac gtcatcaatg acgttgtacc 1860 acacatcatt actgtacacc tttgggctta ggtctagatg tccacataaa taattatgtg 1920 ggcctagaga cctggcccac attgttttgc ctgttctgct atcaccctca atgacaatac 1980 ttatgggtct ccatggccgc gcagcggaag atacgacgtt ctcggcgacc cactcgtcaa 2040 gttcatctgg aacttgatta aaagaagaag aaagaaatgg agaaatataa acttctaaag 2100 gaggactaaa aatcctatct aaatttgaac ttaaattatg aaattgtaaa atatagtcct 2160 ttggggcctt ctcttttaat atattgaggg cctcggattt actgcctgaa ttgagtgcct 2220 cggcatatgc gtcgttggca gattgctgac ctcctctagc tgatctgcta tcgatttgga 2280 aaactccaaa atcaatgaag tctccgtctt tctccacgta ggtcttgaca tctgttgagc 2340 tcttagctgc ctgaatgttc ggatggaaat gtgctgacct gtttggggat accaggtcga 2400 agaaccgttg gttcttacat tggtatttgc cttcgaattg gataagcaca tggagatgtg 2460 gttccccatt ctcgtggagt tctctgcaaa ctttgatgta ttttttattt gttggggttt 2520 ctaggttttt taattgggaa agtgcttcct ctttagagag agaacaattg ggatatgtta 2580 ggaaataatt tttggcatat attttaaata aacgaggcat gttgaaatga attggtgtcc 2640 ctcaaagctc tatggcaatc ggtgtatcgg tgtcttactt atacctggac tactaatggc 2700 tatttggtaa ttttgtaaaa gcacattgca attcaacatt caaaattcaa aaatcaaatc 2760 aataaagcgg ccatccgtac aatatt 2786 //