ID   FJ621495; SV 1; linear; genomic RNA; STD; VRL; 856 BP.
XX
AC   FJ621495;
XX
DT   17-FEB-2009 (Rel. 99, Created)
DT   10-JUN-2010 (Rel. 105, Last updated, Version 2)
XX
DE   Cucumber mosaic virus isolate Simp2 coat protein gene, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-856
RX   DOI; 10.1007/s10658-010-9600-6.
RX   AGRICOLA; IND44381595.
RA   Berniak H., Kaminska M., Malinowski T.;
RT   "Cucumber mosaic virus groups IA and II are represented among isolates from
RT   naturally infected lilies";
RL   Eur. J. Plant Pathol. 127(3):305-309(2010).
XX
RN   [2]
RP   1-856
RA   Berniak H.;
RT   ;
RL   Submitted (13-JAN-2009) to the INSDC.
RL   Department of Plant Protection/Virology Laboratory, Research Institute of
RL   Pomology and Floriculture, Pomologiczna 18, Skierniewice 96-100, Poland
XX
DR   MD5; fd98266a7ada9f8ea3328a02e39d0ffe.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..856
FT                   /organism="Cucumber mosaic virus"
FT                   /host="oriental lily hybrid cv. Simplon"
FT                   /lab_host="Nicotiana rustica L."
FT                   /isolate="Simp2"
FT                   /serotype="II"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="Jan-2008"
FT                   /db_xref="taxon:12305"
FT   CDS             83..739
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q9WAB5"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WAB5"
FT                   /protein_id="ACM89096.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLKLNRT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 856 BP; 189 A; 206 C; 204 G; 257 T; 0 other;
     tgcttctccg cgagttagcg tttagttgtt cacctgagtc gtgcgtttct ttgtatttgt        60
     attttcgcgt cttagtgtgc ctatggacaa atctggatct cccaatgcta gtagaacctc       120
     ccggcgtcgt cgcccgcgta gaggttctcg gtccgcttct ggtgcggatg cagggttgcg       180
     tgctttgact cagcagatgc tgaaactcaa tagaaccctc gccattggtc gtcccactct       240
     taaccaccca accttcgtgg gtagtgaaag ctgtaaaccc ggttacactt tcacatctat       300
     taccctgaaa ccgcctgaaa ttgaaaaagg ttcatatttt ggtagaaggt tgtctttgcc       360
     agattcagtc acggactatg ataagaagct tgtttcgcgc attcaaatta ggattaatcc       420
     tttgccgaaa tttgattcta ccgtgtgggt tacagttcgg aaagtacctt catcatccga       480
     tctttccgtc gccgccatct ctgctatgtt tggcgatggt aattcaccgg ttttggttta       540
     tcagtatgct gcgtccggag ttcaggccaa caataagtta ctttatgacc tgtccgagat       600
     gcgtgctgat atcggcgaca tgcgtaagta cgccgtcctg gtttactcga aagacgataa       660
     actagagaag gacgagattg tacttcatgt cgacgtcgag catcaacgaa ttcctatctc       720
     acggatgctc ccgacttagt ccgtgtgttt accggcgtcc gaagacgtta aactacactt       780
     tcaatcgcga gtgctgagtt ggtagtattg cttcaaactg cctgaagtcc ctaaacgtgt       840
     tgttgcgcgg aacggt                                                       856
//