ID FJ620684; SV 1; circular; genomic DNA; STD; VRL; 2733 BP. XX AC FJ620684; XX DT 11-FEB-2009 (Rel. 99, Created) DT 17-MAR-2013 (Rel. 116, Last updated, Version 3) XX DE Wheat dwarf virus from Iran, complete genome. XX KW . XX OS Wheat dwarf virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2733 RA Behjatnia S.A.A., Afsharifar A.R., Amid Motlagh M.H., Tahan V., Niazi A., RA Izadpanah K.; RT "Widespread occurrence and molecular characterization of barley dwarf RT mastrevirus in Iran"; RL Unpublished. XX RN [2] RP 1-2733 RA Behjatnia S.A.A., Afsharifar A.R., Amid Motlagh M.H., Tahan V., Niazi A., RA Izadpanah K.; RT ; RL Submitted (13-JAN-2009) to the INSDC. RL Plant Protection, Plant Virology, Bajgah, Shiraz, Fars 7144465186, Iran XX DR MD5; 612ebe74d6d0e1d029680434727b1ef9. DR EuropePMC; PMC4311259; 25633348. XX FH Key Location/Qualifiers FH FT source 1..2733 FT /organism="Wheat dwarf virus" FT /host="Hordeum vulgare" FT /mol_type="genomic DNA" FT /country="Iran" FT /collection_date="May-2006" FT /note="originally submitted as Barley dwarf virus" FT /db_xref="taxon:10834" FT misc_feature join(2500..2733,1..170) FT /note="large intergenic region" FT gene 171..443 FT /gene="V1" FT CDS 171..443 FT /codon_start=1 FT /gene="V1" FT /product="MP" FT /note="movement protein" FT /db_xref="GOA:B9W0A0" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B9W0A0" FT /protein_id="ACM68956.1" FT /translation="MDPVFTPPRTIRADQYQAPSDPGSSDYAWRTFVFVSFGLLIAVGV FT VWLAYTLFLKDCILVWKAKKQRRTEEIGYGNTPARPNGDQQGLPR" FT gene 415..1197 FT /gene="BDV-V2" FT CDS 415..1197 FT /codon_start=1 FT /gene="BDV-V2" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:B9W0A1" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B9W0A1" FT /protein_id="ACM68957.1" FT /translation="MVTNKDSRGKGKRKLDEADSSGRWKGAVYKRRKQAYKVVPVKPPA FT LCVYRYNWLNSDKTNIVVGNTPRVDLITCFAAGKADNNRHTNQTVLYKFNIQGTCYVAD FT VSSIYVGPIRVYHWLVYDAEPKQATPDSTDIFTMPWNLLPSSWTVQRAWSHRFVVKRKW FT CVNLVSDGKKVGSKSVDPRYNYVAGKNIVDASKFCKGLRVTTEWMNTGDGKIGDIKKGA FT LYLITCTRGGVSGDSASLSFEVVCAYTHACYFKSIGIQ" FT misc_feature 1198..1369 FT /note="small intergenic region" FT gene complement(1370..2499) FT /gene="C1-2" FT CDS complement(join(1370..1783,1870..2499)) FT /codon_start=1 FT /gene="C1-2" FT /product="RepA" FT /note="replicase protein" FT /db_xref="GOA:B9W0A2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B9W0A2" FT /protein_id="ACM68959.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQFALESLRTLLAKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPHALNLRMDTSPFNIFHPNIQAAKDCNQVR FT DYITKEVDSDVNTAEWGTFIAVTTPGRKDRDADMKQIIESSSSREEFLSMVCHRFPFEW FT SIRLKDFEYTARHLFPDPVATYTPEFPIESLMCHETIESWKNEHLYSESPGRHKSLYIC FT GPTRTGKTSWARSLGTHNYYNSLVDFTTYDVNAKYNVIDDIPFKFTPNWKCFVGAQRDF FT TVNPKYGKRKMIRGGIPCIILVNPDEDWLKDMTPDQSDYMYSNAIVHYMYEGESFFAFG FT ENVTASQ" FT gene complement(1705..2499) FT /gene="C1-1" FT CDS complement(1705..2499) FT /codon_start=1 FT /gene="C1-1" FT /product="Rep" FT /note="replicase protein" FT /db_xref="GOA:B9W0A3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B9W0A3" FT /protein_id="ACM68958.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQFALESLRTLLAKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPHALNLRMDTSPFNIFHPNIQAAKDCNQVR FT DYITKEVDSDVNTAEWGTFIAVTTPGRKDRDADMKQIIESSSSREEFLSMVCHRFPFEW FT SIRLKDFEYTARHLFPDPVATYTPEFPIESLMCHETIESWKNEHLYSVSLESYILCTST FT PADKAVSDLEWMDDYSRSHRDGISPYTSADQQEQERLPGQGL" XX SQ Sequence 2733 BP; 689 A; 595 C; 755 G; 694 T; 0 other; accctgcgtg gtgggtcccg aggcgcactc ggcttttcgt gagtgcgccg aggcttttgg 60 accacgtctt ttggacatca ctttaataat tgtgggaatc tatcacacgt tggagacgca 120 attatgtgtc gttgcttagc ttataaggaa gtcccgctta gtgcacttag atggatccgg 180 tatttacacc gccgcgtact atacgggcag atcaatacca ggccccttcc gatcccggtt 240 cctccgacta cgcctggcga acctttgtgt tcgtttcatt cggtttatta atagccgtag 300 gcgtagtttg gcttgcttac actctgttct tgaaggattg tattttagtg tggaaggcga 360 agaagcagag gaggaccgag gaaattggtt acggtaatac accggccaga ccaaatggtg 420 accaacaagg actcccgagg taaggggaag cgtaagctcg atgaagcgga ttcgagcgga 480 aggtggaagg gggctgtgta taagcggcgt aaacaggcgt acaaggtagt acccgtgaag 540 ccccctgctc tatgtgtgta tcggtacaac tggctgaatt ccgacaagac caacatcgtg 600 gtgggtaaca cccctcgagt tgatctgatt acctgcttcg cagcgggtaa ggccgataac 660 aatcggcata caaatcagac ggtcctctac aagttcaaca tacaggggac ctgttacgtg 720 gcggacgtat catctatata cgttggccct atacgggtct atcactggtt ggtctatgat 780 gcagagccga aacaggcaac gccggactcc actgacatct ttacgatgcc atggaatctg 840 ctgccgagtt cgtggacggt gcagagggct tggtcgcatc ggttcgtggt gaagaggaag 900 tggtgcgtga accttgtctc cgatgggaag aaggtcggat ccaagtcggt ggatcctcgt 960 tacaactacg tagcggggaa gaatattgtt gacgcctcca agttctgcaa aggtttgcgg 1020 gtcacgacgg agtggatgaa cacgggtgac ggcaagatag gcgacattaa gaagggcgcc 1080 ctgtatctga taacatgtac tagaggtggt gtcagtggtg acagtgcctc tctgtcgttc 1140 gaagttgtat gtgcctatac gcacgcgtgt tacttcaaat ccattgggat tcaataataa 1200 aatagtattt tattcatctc ttgtcattcg attacagagg ctcggctaag agcaaagata 1260 aaccaaacta tgacatacaa cacactcata accaaaacat cgaaaaacga aatacaagga 1320 gctgagatca cacaatttta gaaaccgtgg ccgtccgccc agaggacagt cactgcgaag 1380 cagtgacatt ttcgccgaag gcgaaaaacg attccccttc atacatataa tgcacaatag 1440 cgttggagta catgtaatcc gactgatcag gagtcatatc tttgagccaa tcttcgtctg 1500 ggttcactaa aatgatgcaa ggtatgccac cccgtatcat tttacgcttc ccgtacttag 1560 gattgacagt gaagtctctc tgagccccga cgaagcactt ccagttaggt gtgaacttga 1620 atgggatgtc gtcgattacg ttgtacttgg cgtttacgtc atatgtcgtg aaatcaacta 1680 ggctgttgta gtagttgtgt gtccctagag accttgccca ggaagtcttt cctgttcttg 1740 ttggtccgca gatgtataag gacttatgcc gtcccggtga ctcctggaat aatcgtccat 1800 ccactctaag tcagatacag ctttatccgc aggagtggaa gtacaaagga tgtatgattc 1860 gaggcttacg gagtagaggt gttcattttt ccagctttca atggtctcat gacacatgag 1920 ggattcgata gggaactcag gtgtgtaagt ggcaactggg tctgggaata gatgtcgtgc 1980 cgtgtattcg aagtctttga gacgtataga ccattcaaac ggaaaacgat ggcagaccat 2040 gctgagaaat tcctcacggg aggaacttga ctcgatgatc tgtttcatat ccgcgtcacg 2100 gtctttacga ccgggggtgg taactgctat gaatgttccc cactcagccg tgttgacatc 2160 ggagtcaacc tctttcgtga tgtaatcacg aacttggttg caatctttgg cggcctggat 2220 atttgggtgg aaaatattaa atggggatgt gtccatacga aggttaagtg catgtggatt 2280 ggtgatcgaa gcacgaagct tgttttgcac gagtacgtgc agatgtggtg atccatcttc 2340 gtgaagctct ctaactgcag cgatgtagag aggctcatat ttggccaaga gagtgcgaag 2400 agactccaag gcgaactgtg gttcaaggat gcattgagga tatgttagga agaggtattt 2460 tgaatagaca cggaacctgg gtgcagatga agatgccatg gaagaagcag aagcccggca 2520 ggtccttagc gaaaaaacgg ggtgtgctca gaaactctac tctctaccct gcgtgggcgt 2580 gtgcagaatt cacaccgaga ggctcggtgt ccacggattt aaatattgca ggaataggtg 2640 ggaacgcggg acccgtcttt cccgcgcgat agcgacgggt ggtcccgcgt gtggtttgtg 2700 gctcggggac ccgccacgca ggaatctaat att 2733 //