Dbfetch
ID FJ619508; SV 2; circular; genomic DNA; STD; VRL; 2578 BP. XX AC FJ619508; XX DT 05-APR-2009 (Rel. 100, Created) DT 15-NOV-2011 (Rel. 110, Last updated, Version 4) XX DE Euphorbia yellow mosaic virus segment DNA-B, complete sequence. XX KW . XX OS Euphorbia yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2578 RX DOI; 10.1007/s00705-011-1070-4. RX PUBMED; 21779908. RA Fernandes F.R., Albuquerque L.C., de Oliveira C.L., Cruz A.R., RA da Rocha W.B., Pereira T.G., Naito F.Y., Dias Nde M., Nagata T., RA Faria J.C., Zerbini F.M., Aragao F.J., Inoue-Nagata A.K.; RT "Molecular and biological characterization of a new Brazilian begomovirus, RT euphorbia yellow mosaic virus (EuYMV), infecting Euphorbia heterophylla RT plants"; RL Arch. Virol. 156(11):2063-2069(2011). XX RN [2] RP 1-2578 RA Fernandes F.R., Faria J.C., Sousa A.R.R.C., Zerbini F.M., Aragao F.J.L.; RT ; RL Submitted (12-JAN-2009) to the INSDC. RL Cenargen/Embrapa, Embrapa, PqEB W5 Norte, Brasilia, DF 70770-900, Brazil XX RN [3] RC Sequence update by submitter RP 1-2578 RA Fernandes F.R., Faria J.C., Sousa A.R.R.C., Zerbini F.M., Aragao F.J.L.; RT ; RL Submitted (10-JAN-2011) to the INSDC. RL Cenargen/Embrapa, Embrapa, PqEB W5 Norte, Brasilia, DF 70770-900, Brazil XX DR MD5; a84ca65ec933043a58958f5c6f996fcd. DR EuropePMC; PMC2974675; 20958988. XX CC On Jan 10, 2011 this sequence version replaced gi:225906898. CC GenBank accession numbers FJ619507-FJ619508 represent the complete CC genome of Euphorbia yellow mosaic virus. XX FH Key Location/Qualifiers FH FT source 1..2578 FT /organism="Euphorbia yellow mosaic virus" FT /segment="DNA-B" FT /host="Euphorbia heterophylla" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="16-Jan-2008" FT /db_xref="taxon:598494" FT gene 450..1220 FT /gene="BV1" FT CDS 450..1220 FT /codon_start=1 FT /gene="BV1" FT /product="BV1" FT /note="nuclear shuttle protein" FT /db_xref="GOA:C1JGV5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:C1JGV5" FT /protein_id="ACO36238.2" FT /translation="MYTTKYRRGGSSSKRRGYSRYPAFKRMQNGKRSEWRRRPSSPCKA FT HDDIKWTAQCIHEDQFGPEFVLGHNIATSTYISYPSMSKTEPNRSRSYIKLRRLRFKGT FT LKVERVHVDVNMIGSNAKIEGVFSMVVIVDRKPHLGPTGCLHTFDEVFGARIHSHGNLT FT VSPSLKDRYYIRHVFKRVISVEKDTMMVDIEGSTCLSTRRSSCWATFKDTERDSCNGVY FT ANISKNAILVYYCWMSDHMSKASTFVSFDLDYVG" FT CDS complement(1315..2199) FT /codon_start=1 FT /product="BC1" FT /db_xref="GOA:E8Z7I4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:E8Z7I4" FT /protein_id="ADV16205.1" FT /translation="MEGSQLVNPPSAFNYIESHRDEYQLSHDLTEIVLQFPSTASQLGA FT RLSRSCMKIDHCVIEYRQQVPINASGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHY FT FSSSFFSLKDPIPWKLYYKVCDSNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIL FT SKQFTDKDIDFSHVGYGKWERRMIRSASSSRLGLQGPIEIRPGESWATRSTIGLGHLDA FT DSDVRDASYPYRELNRLGTPVLDPGDSASVVAAQRTHSNISMSMGQLNEIVRSTVQECI FT STNCIPPRNKTLD" XX SQ Sequence 2578 BP; 706 A; 554 C; 590 G; 728 T; 0 other; gcggccatcc gtataatatt accggatggc cgcgattttt tggtgtcctc tatccccggc 60 ccaggcccaa acgcatttag ttttgtccgg gaccacacac agcaactaaa gctgaccaat 120 cagactgcgc gtgacgtgtc tatttaaata caacttactt gacaagttgt ggtccctata 180 aatgtagatg acaacgacag cacatcaagt ctttaatttg aattaagccc actttgtatg 240 gcgggagcct tcagtcgttg tggtcctcaa ccacaattcg aaataagctg tcgtcaagcc 300 gacgtacatc cgagtcgctc gagagctcca cggtccaatc ataaacgtgt tacatagtct 360 cgttaactca accgaatttg tggactggtt atttaaggac gatatggatt ggacctcata 420 tcacatcatc tcgataacca ttttatgaaa tgtatacgac taagtataga cgtggtgggt 480 catcttctaa gcgacgaggg tattcacgat atccagcgtt taagcgaatg cagaatggaa 540 aacgttccga atggagacgt cgacccagca gtccttgtaa ggcacatgac gatattaagt 600 ggacggccca atgtatacat gaagatcaat tcggcccaga atttgtattg ggccataata 660 tagctacgtc gacctatatt agctacccta gtatgagtaa gactgaaccg aaccgatccc 720 gatcgtatat taagttgcgg cgtctacgct ttaagggcac tctgaaggtc gagcgtgtac 780 acgtcgatgt taacatgatc ggttcgaatg caaagataga aggcgtattc tctatggtcg 840 ttattgtcga ccgtaaacct cacttgggtc caactggatg ccttcataca tttgatgagg 900 tctttggcgc caggatccac agtcatggaa atctaaccgt cagtccttct ttgaaggatc 960 ggtactacat ccgccacgta ttcaagcgcg tcatatctgt cgagaaagac acgatgatgg 1020 tggatataga agggtcgacg tgtttatcta ctaggcgttc ttcttgctgg gctactttta 1080 aggatacgga acgagactca tgtaatggtg tatatgcgaa tataagcaag aacgccatat 1140 tagtgtatta ttgctggatg tcggatcata tgtccaaggc atctacattt gtatcatttg 1200 acctcgatta tgtcggatga ccaataagaa catatttaac atgatataat caaatagcta 1260 cagcgtacat gcaaatgata acaacctcag taattgaatt aaataattta ttatttaatc 1320 aagcgtttta tttctgggag gaatacaatt agtgctgata cattcctgaa cggttgacct 1380 aactatctcg ttcagctgac ccattgacat cgatatgttc gaatgtgttc tctgagcagc 1440 tactacggaa gctgaatctc ccgggtctaa tacgggagtc cctagcctat ttaactcccg 1500 atatgggtaa gaggcgtctc tcacatctga atccgcatct aaatggccca gtcctatagt 1560 agaccttgtg gcccatgatt caccgggcct tatttcaatt gggccttgta gcccaagtct 1620 cgatgatgat gcggatctaa tcattcttct ctcccatttg ccgtagccca catgactgaa 1680 gtcgatatcc ttatctgtaa actgtttgga caggatcttg acagttggcg ctctgaaagg 1740 gatatcaacg gaatgttttg ccgtcgataa cttcagttta cccttgaact tcgcgaaatg 1800 cgtcctctga tggacgttcg agtcgcaaac cttataatat agtttccaag gaattgggtc 1860 tttgagtgag aagaatgaag atgaaaagta gtggagatct atgttacatc gtatggggaa 1920 tgtccatgac gcctgtaagg actcattgtc cgtcattctc ttgtcgtgaa tctccactac 1980 taccgagccc gacgcattaa ttggcacttg ttgcctatat tctattacgc aatggtcgat 2040 cttcatgcag ctgcgtgaga gtcgggctcc taattgagac gccgttgagg ggaattgcaa 2100 gactatctca gttaggtcat gcgatagctg atactcgtca cgatgtgact ctatgtaatt 2160 gaaagcgctc ggcggattta ctaactgaga cccctccatt atattatgga aacttgcccg 2220 cgcagcggca ccccttcccc caaattgaac gactgaggga aattgatagg tgccaacttt 2280 atggaaggac gatatgcgtt agcgataaga atttggggaa atttcgaaga tacgataagc 2340 ctatgtgcat attatgattt aatcggctga gaatttgaga tgaagaagtg gaaatttgcc 2400 gataggttag ctattgaagg tctatatata ggcagtcaga tgcgatatgc tacaggctga 2460 tggcaaattt gtaaatataa gccaggacac cagggggagt cctctcaaaa acctattttt 2520 cgtggtgtcc tggtgtccca tttatactaa aagcctctag gacaccaggg ggtacgtg 2578 //