ID   FJ618539; SV 1; linear; genomic RNA; STD; VRL; 1664 BP.
XX
AC   FJ618539;
XX
DT   24-FEB-2009 (Rel. 99, Created)
DT   24-FEB-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Lily mottle virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Lily mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1664
RA   Cohen D., Pearson M.N., Cowell S.J., Jones D., Blouin A., Lebas B.S.M.,
RA   Shiller J.B., Clover G.R.;
RT   "A survey of viruses of flower bulbs in New Zealand";
RL   Unpublished.
XX
RN   [2]
RP   1-1664
RA   Shiller J.B., Cohen D., Pearson M.N., Cowell S.J., Jones D., Blouin A.,
RA   Lebas B.S.M., Clover G.R.;
RT   ;
RL   Submitted (11-JAN-2009) to the INSDC.
RL   Ministry of Agriculture and Forestry, 231 Morrin Rd, St Johns, Auckland,
RL   New Zealand
XX
DR   MD5; 0b3c4410021ae04c6e17566cbe4346a6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1664
FT                   /organism="Lily mottle virus"
FT                   /host="Lillium sp."
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /collection_date="24-Nov-2005"
FT                   /db_xref="taxon:32624"
FT   CDS             <1..1443
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C0KKZ2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:C0KKZ2"
FT                   /protein_id="ACN22474.1"
FT                   /translation="GQPSTVVDNTIMVILAIHYSYKYLKITKPLDEFCKYFVNGDDLLL
FT                   AVAPEFEYLLDHFANTFQQLGLNYDFSSRTKNREELWFMSHRGIMTDGLYIPKLEPERI
FT                   VSILEWDRAVEPVHRLEAICASMIEAWGYPQLLHEIRKFYYWVLEQAPYSELAQLGKAP
FT                   YLSEAALRALYTGEATSQDELERYLAVLNLEGECGGAEIVAFQANETLNAGASSSTQAS
FT                   RSTRPEAAIDVAPQQSSEARVRDRDVDAGTVGTYQIPRLKALATKINVPKVKGRMIVNT
FT                   GHLVNYNPDQTDISNTRSTQKQFEAWYNAVKDEYGLNDESMALAMNGLMVWCIENGTSP
FT                   NVNGVWLMMDGDQQVEFPLRPILEHAKPTLRQIMAHFSNLAEAYIEKQNLEKPYMPRYG
FT                   LQRNLTDFNLARFAFEFYEVTSRTPARAKEAHFQMKTAALRGKQSKLFGLDGKVNTQDE
FT                   DTERHTADDVNKNMHSLLGISM"
FT   3'UTR           1444..1664
XX
SQ   Sequence 1664 BP; 493 A; 369 C; 396 G; 406 T; 0 other;
     gggcagccat caacagttgt cgacaatact attatggtca tattggccat acattattca        60
     tataaatatc taaagataac aaaacctctg gacgaattct gtaagtactt tgttaatggt       120
     gatgacctat tgctggcagt ggcgcctgag ttcgaatacc tattggacca ctttgcgaac       180
     actttccagc aattaggact caactatgac ttctcgtcca gaaccaaaaa tagggaagaa       240
     ctatggttca tgtcgcaccg tgggatcatg acggatggct tgtacatacc gaaacttgaa       300
     ccggagcgca ttgtatccat actggaatgg gacagagcgg tggaaccagt ccacaggctg       360
     gaggcgatct gcgcatctat gattgaggcg tggggatacc cgcagttgtt gcatgaaatc       420
     agaaagttct actactgggt gctcgaacaa gccccttatt ctgaacttgc acaactcggt       480
     aaagctccat acttatcgga ggccgctctt cgtgcgctgt acactggtga ggcaacgagt       540
     caggacgagc tcgagcgtta cttggcagtc ttaaacttag aaggtgaatg tggtggcgca       600
     gagattgtgg cgttccaggc aaatgagaca ctcaacgctg gagcttccag ttccacacaa       660
     gcgagccgat cgactcgacc tgaggctgca attgatgtgg caccgcaaca gagttctgag       720
     gctagagtgc gtgatcgtga tgttgatgcc ggcaccgtgg gaacatacca aatcccacga       780
     ctgaaggcac tagcaacaaa gatcaacgta cccaaggtca aggggcgaat gatagtgaac       840
     actgggcacc ttgtgaatta caacccagac caaacagata tttcaaatac aaggtcaacc       900
     cagaagcagt ttgaggcttg gtacaacgca gtgaaagacg agtatggtct caacgacgag       960
     agtatggctc tcgcaatgaa tggtctgatg gtttggtgca tagagaatgg cacctcacca      1020
     aatgtaaatg gcgtgtggct catgatggac ggagatcagc aagttgaatt tcctttacgt      1080
     cctatacttg aacacgcaaa accgacgctg cgccaaatta tggcgcattt ctcaaacctc      1140
     gctgaagctt atattgagaa gcaaaattta gagaaaccgt acatgcctag gtacggcctt      1200
     cagcgaaatc tcaccgactt caatctagca cgatttgctt ttgaattcta tgaagttact      1260
     tcacgcacgc cagcacgcgc taaagaagca cacttccaaa tgaaaacagc cgctttacgt      1320
     ggaaaacaat cgaagctatt tgggctagat ggaaaggtga acacccaaga tgaggacacg      1380
     gagaggcata cagcagatga tgtcaataaa aacatgcact ccttacttgg aatttctatg      1440
     taaatcctcg aataaacagc actagtaact tgctaatata tctatctcgt ttattccgta      1500
     gtatcctatc tattagctca actctttgtg ttatagtgtg gtttaccatg aacgcacatt      1560
     gtagttgaga accgagctcc ttgttggtgt ctagttgcag agaggtttcc tcgcgttttc      1620
     ttagccacta gtcttggaag aagggacaaa aaaaaaaaaa aaaa                       1664
//