ID FJ609655; SV 1; linear; genomic DNA; STD; VRL; 2781 BP. XX AC FJ609655; XX DT 01-APR-2009 (Rel. 100, Created) DT 26-AUG-2010 (Rel. 105, Last updated, Version 2) XX DE Tomato yellow leaf curl virus isolate Guasave, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RX DOI; 10.1094/PDIS-93-5-0545A. RX AGRICOLA; IND44237896. RA Gamez-Jimenez C., Romero-Romero J.L., Santos-Cervantes M.E., RA Leyva-Lopez N.E., Mendez-Lozano J.; RT "Tomatillo (Physalis ixocarpa) as a Natural New Host for Tomato yellow leaf RT curl virus in Sinaloa, Mexico"; RL Plant Dis. 93(5):545-545(2009). XX RN [2] RP 1-2781 RA Romero-Romero J.L., Gamez-Jimenez C., Camacho-Beltran E., Leyva-Lopez N.E., RA Mendez-Lozano J.; RT ; RL Submitted (11-DEC-2008) to the INSDC. RL Agropecuario, CIIDIR-IPN Unidad Sinaloa, Blvd. Juan de Dios Batiz #250, RL Guasave, Sin 81101, Mexico XX DR MD5; 6e4f4fe6569b66010cd1e8de8f2a0569. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Physalis ixocarpa (tomatillo)" FT /isolate="Guasave" FT /mol_type="genomic DNA" FT /country="Mexico:Juan Jose Rios, Guasave, Sinaloa" FT /collection_date="Dec-2006" FT /db_xref="taxon:10832" FT CDS 314..664 FT /codon_start=1 FT /product="V2 pre-coat protein" FT /db_xref="GOA:Q2EI17" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2EI17" FT /protein_id="ACM46741.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT CDS 474..1250 FT /codon_start=1 FT /product="V1 capsid protein" FT /db_xref="GOA:B9USF0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B9USF0" FT /protein_id="ACM46740.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVIRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1247..1651) FT /codon_start=1 FT /product="C3 protein" FT /db_xref="GOA:Q00GE0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q00GE0" FT /protein_id="ACM46744.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT CDS complement(1392..1799) FT /codon_start=1 FT /product="C2 protein" FT /db_xref="GOA:A5A3G5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5A3G5" FT /protein_id="ACM46743.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1708..2781) FT /codon_start=1 FT /product="C1 replication-associated protein" FT /db_xref="GOA:B9USF3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B9USF3" FT /protein_id="ACM46742.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVS FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT CDS complement(2337..2630) FT /codon_start=1 FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5A3G7" FT /protein_id="ACM46745.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 757 A; 528 C; 612 G; 884 T; 0 other; gttgaaatga attggtgtcc ctcaaagctc tatggcaatc ggtgtatcgg tgtcttactt 60 atacctggac accaaatggc tatttggtaa ttttgtaaaa gtacattgca attcaaaatt 120 caaaattcaa aaatcaaatc attaaagcgg ccatccgtat aatattaccg gatggccgcg 180 ccttttcttt ttatgtggtc cccacgaggg ttccacagac gtcactgtca accaatcaaa 240 ttgcatcctc aaacgttaga taagtgttca tttgtcttta tatacttggt ccccaagtag 300 tttgtcttgc actatgtggg atccacttct aaatgaattt cctgaatctg ttcacggatt 360 tcgttgtatg ttagctatta aatatttgca gtccgttgag gaaacttacg agcccaatac 420 attgggccac gatttaatta gggatcttat atctgttgta agggcccgtg actatgtcga 480 agcgaccagg cgatataatc atttccacgc ccgtctcgaa ggttcgccga aggctgaact 540 tcgacagccc atacagcagc cgtgctgctg tccccattgt ccaaggcaca aacaagcgac 600 gatcatggac gtacaggccc atgtaccgga agcccagaat atacagaatg tatcgaagcc 660 ctgatgttcc tcgtggatgt gaaggcccat gtaaagtcca gtcttatgag caacgggatg 720 atattaagca tactggtatt gttcgttgtg ttagtgatgt tattcgtgga tctggaatta 780 ctcacagagt gggtaagagg ttctgtgtta aatcgatata ttttttaggt aaagtctgga 840 tggatgaaaa tattaagaag cagaatcaca ctaatcaggt catgttcttc ttggttcgtg 900 atagaaggcc ttatggaaac agcccaatgg attttggaca ggtttttaat atgttcgata 960 atgagcccag taccgcaacc gtgaagaatg atttgcggga taggtttcaa gtgatgagga 1020 aatttcatgc tacagttatt ggtgggccct ctggaatgaa ggaacaggca ttagttaaga 1080 gattttttag aattaacagt catgtaactt ataatcatca ggaggcagcc aagtatgaga 1140 accatactga aaacgccttg ttattgtata tggcatgtac gcatgcctct aatccagtgt 1200 atgcaactat gaaaatacgc atctatttct atgattcaat atcaaattaa taaaatttat 1260 attttatatc atgagtttct gttacattta ttgtgttttc aagtacatca tacaatacat 1320 gatcaactgc tctgattaca ttgttaattg aaattacacc aagactatct aaatacttaa 1380 gaacttgata tctaaatact cttaagaaac gaccagtctg aggctgtaat gtcgtccaaa 1440 ttcggaagtt gagaaaacat ttgtgaatcc ccaatacctt cctgatgttg tggttgaatc 1500 ttatctgaat ggaaatgatg tcgtggttca ttagaaatgg cctctggctg tgttctgtta 1560 tcttgaaata gaggggattg tttatctccc agataaaaac gccattctct gcttgaggag 1620 cagtgatgag ttcccctgtg cgtgaatcca tgattgttgc agttgatgtg gaggtagtat 1680 gagcagccac agtctaggtc tacacgctta cgccttattg gtttcttctt ggctatcttg 1740 tgttggacct tgattgatac ttgcgaacag tggctcgtag agggtgacga aggttgcatt 1800 cttgagagcc caatttttca aggatatgtt tttttcttcg tctagatatt ccctatatga 1860 ggaggtaggt cctggattgc agaggaagat agtgggaatt ccccctttaa tttgaatggg 1920 cttcccgtac tttgtgttgc tttgccagtc cctctgggcc cccatgaatt ccttgaagtg 1980 ctttaaataa tgcgggtcta cgtcatcaat gacgttgtac cacgcatcat tactgtacac 2040 ctttgggctt aggtctaaat gtccacataa ataattatgt gggcctagag acctggccca 2100 cattgttttg cctgttctgc tatcaccctc aatgacaata cttatgggtc tccatggccg 2160 cgcagcggaa gatacgacgt tctcggcgac ccactcttca agttcatctg gaacttgatt 2220 aaaagaagaa gaaagaaatg gagaaacata aacttctaaa ggaggactaa aaatcctatc 2280 taaattggaa cttaaattat gaaattgtaa aatatagtcc tttggggcct tctcttttaa 2340 tatattgagg gcctcggatt tactgcctga attgagtgcc tcggcatatg cgtcgttggc 2400 agattgctga cctcctctag ctgatctgcc atcgatttgg aaaactccaa aatcaatgaa 2460 gtctccgtct ttctccacgt aggtcttgac atctgttgag ctcttagctg cctgaatgtt 2520 cggatggaaa tgtgctgacc tgtttgggga taccaggtcg aagaaccgtt ggttcttaca 2580 ttggtatttg ccttcgaatt ggataagcac atggagatgt ggttccccat tctcgtggag 2640 ttctctggaa actttgatgt attttttatt tgttggggtt tctaggtttt ttaattggga 2700 aagtgcttcc tctttagaga gagaacaatt gggatatgtt aggaaataat ttttggcata 2760 tattttaaat aaacgaggca t 2781 //