ID FJ607140; SV 1; linear; genomic RNA; STD; VRL; 3196 BP. XX AC FJ607140; XX DT 09-FEB-2009 (Rel. 99, Created) DT 09-FEB-2009 (Rel. 99, Last updated, Version 1) XX DE Bacopa chlorosis virus segment RNA 1 p1 protein (BaCVs1gp1) gene, partial DE cds. XX KW . XX OS Bacopa chlorosis virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus; unclassified Ilarvirus. XX RN [1] RP 1-3196 RA Maroon-Lango C.J., Hsu H.-T., Aebig J., James C., Hammond J.; RT "Bacopa chlorosis virus, a new ilarvirus affecting bacopa"; RL Unpublished. XX RN [2] RP 1-3196 RA Maroon-Lango C.J., Hsu H.-T., Aebig J., James C., Hammond J.; RT ; RL Submitted (05-JAN-2009) to the INSDC. RL ARS, US Department of Agriculture, 10300 Baltimore Avenue, Beltsville, MD RL 20705, USA XX DR MD5; fcd719cff37713fe591037ae89000059. XX FH Key Location/Qualifiers FH FT source 1..3196 FT /organism="Bacopa chlorosis virus" FT /segment="RNA 1" FT /host="Sutera cordata cv. Snowflake" FT /mol_type="genomic RNA" FT /country="USA:Maryland" FT /db_xref="taxon:593888" FT 5'UTR 1..34 FT gene 35..>3196 FT /locus_tag="BaCVs1gp1" FT CDS 35..>3196 FT /codon_start=1 FT /locus_tag="BaCVs1gp1" FT /product="p1 protein" FT /note="viral replicase" FT /db_xref="GOA:B9VV81" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B9VV81" FT /protein_id="ACM63154.1" FT /translation="MDSTNFSLGSSSRSGVPFVDINSLLTSYIEHVKSDETTNVGRFLG FT EVALKEIKSQVDTSHGDFQKLNVGFQLTSDEKNALKSSFPGLEICFKDSCHSSHSFAAA FT HRVCETTEVYKRFNTKKEKIIDLGGNYVTHAKQGRDNVHSCCPILDVRDGARHTDRYMS FT LASAVEKHHRDLPVDFCCKKFEDCNVQAPYAMAIHSISDIPITTVAHHCVRRGVRKLIA FT TVMMDPAMLIYDSGHMPLLNVNWEKEDVKCGDDFKTLIHFHFVDAPGLSYSHDFSVLSQ FT YMTTNQVIVGEGYAYRVERTSDLNGVFIVELTLSMSDGISMNHLRRLNDISCAWLSKLR FT KRVFVKLAVPISHEWFTESFEIRWALMDESMVRYVSEAAFRQYSKTKDAETVVQYIATI FT LSSSSNHVVINGITMRSGSPIAIDEYVPLAVSFYALAAWRYSMIAPGLSAVKTRVRRNV FT EDYQSKPDCSEETLSDLLREAQQSVLPDDDLGLKNCEKIPDMIKSAGLRFFKGKTLRKV FT RDDTMLLQSRSFLREKIHEIREFFGLTLTDSDFNFVEGVPTCLKSTDVWETFKSNLNFP FT SCIDVTECSYDLMNKHLAQKIEVEREEKQRKDFLDARDRALITIAKVLEKPDVPDGLLP FT ILDLCEVKDELVSATNSLNLTPQSIAAAESDSTVNPYAESIKEAIHYFNELEMVNTRNL FT RTLGSYINWKPSAPGTYRALKGRNETVKVFIPFENKWYPDTKDLCQYERAMTEDGYVSL FT QWTSDGKSLSDTCVASLRRFGAIVVDDSCVFNSGQRMIPALESALKVKPNFNVTIVDGV FT AGCGKTTHLKRVSRFESNPDLVLTSNRSSADELKETLTCSDAMKYRIRTVDSFLMLKNW FT FSADRLLFDECFLTHAGCVYAAASLAQVKEVIALGDTEQVPFISRLPEFRMQHHKLSGK FT IECQTTTYRCPRDATYCLKTQFYKTKSVKTASVVERSIDLIPISSPIQIPCEDNVLYIT FT HTRADKDALMKIPGFNKSNIKTTHEAQGDTWDNVIAFRLSKTTNLLHSGKGPDLGCCHN FT LVAISR" XX SQ Sequence 3196 BP; 903 A; 621 C; 710 G; 962 T; 0 other; gtattgtgtt tcgtatcaga acacagcctc ctttatggat tccacaaatt tttctctcgg 60 ttcatcttct cgctcgggtg ttccatttgt tgacatcaat agcttattaa caagttatat 120 tgaacatgtc aaatcagatg aaacaaccaa tgtcgggcgg tttttgggcg aggtagcctt 180 aaaagagatc aaatctcaag ttgacaccag tcacggtgat ttccagaagt tgaacgttgg 240 tttccaacta acttctgatg aaaagaatgc cttaaaatct agttttccag gactagaaat 300 ttgttttaag gattcatgtc attcctcaca tagttttgct gccgcacaca gagtgtgtga 360 gaccacagaa gtgtacaaac gtttcaacac gaagaaagaa aaaatcatcg accttggggg 420 taattatgtt acccatgcca agcaaggtag agacaatgtg cattcgtgtt gtcctattct 480 tgatgtacgc gatggagcgc ggcatacgga taggtacatg tcacttgctt ctgcagttga 540 gaaacaccat agggatttac cggtggattt ctgttgtaag aaattcgaag actgcaatgt 600 tcaagctcca tatgccatgg caatacattc cataagcgat atccctataa ccaccgttgc 660 tcaccattgt gtgagacggg gagttagaaa actcatcgct actgttatga tggacccagc 720 catgttgatt tatgacagtg gtcatatgcc cttactcaat gtcaattggg aaaaggaaga 780 tgttaagtgt ggtgatgatt tcaaaacgct tattcatttc cactttgttg atgccccagg 840 tttaagttac tcgcatgatt tttccgtttt atcacagtat atgactacca atcaagtgat 900 tgttggtgaa ggatatgcat acagagtcga gaggaccagt gatttaaacg gtgtttttat 960 cgttgagttg acattgagca tgtccgatgg aatatcgatg aaccatcttc ggcggcttaa 1020 cgatatttct tgcgcgtggc tttcaaaact tcggaagaga gttttcgtca aattggccgt 1080 gccaatttca cacgaatggt ttacagaatc ttttgagatt cgttgggcgt tgatggatga 1140 gtctatggtt agatatgtct cggaagctgc ctttcggcag tattcgaaga ctaaagacgc 1200 tgagactgtt gtccagtata tagccaccat tttatcgtca tcttcaaatc atgtcgtgat 1260 caatgggatt actatgcgga gtggaagtcc cattgcgatt gacgaatacg ttccattagc 1320 tgtgtccttt tatgctcttg cagcatggag gtacagcatg attgcccctg gtctttccgc 1380 ggtgaagacg agagttcgac ggaatgtcga agattaccag agtaaacctg attgctctga 1440 agaaactctc tcggatttac tacgagaagc tcaacaatca gtcttaccag atgatgatct 1500 gggtttaaag aattgtgaga aaattccgga catgattaaa tcagccggtc tcaggttctt 1560 taaaggtaag acgttgagaa aagttaggga tgataccatg cttcttcaat ctcggagctt 1620 tcttcgtgag aaaatacatg aaattcgcga attttttggt ttaactctca cagattccga 1680 ttttaatttc gtcgaaggtg ttccgacatg tttgaaatcg actgacgttt gggaaacttt 1740 caagtctaac ttgaatttcc cgtcttgcat tgatgttacc gagtgttctt acgacttgat 1800 gaacaagcat cttgctcaga agattgaagt cgaacgtgaa gagaaacaga ggaaagattt 1860 cctcgatgcc agggataggg ctttgataac aatagccaaa gttcttgaaa aacctgatgt 1920 tcccgatggt cttttgccaa ttcttgattt gtgtgaagtt aaggatgagt tggtttccgc 1980 cactaattca ttgaacttaa caccacaatc catcgctgcc gcagaatccg attctaccgt 2040 caatccttat gccgagagta ttaaagaggc aattcactac tttaatgaac tcgagatggt 2100 taatacaagg aatttgagaa ctctaggttc gtacataaac tggaaaccat ccgctccagg 2160 tacgtaccga gctttgaaag gtagaaacga aactgtgaag gtttttattc catttgaaaa 2220 taaatggtat cctgacacca aagacctatg tcagtatgaa agggcaatga ctgaagacgg 2280 ttatgtcagt cttcaatgga cttctgatgg taagtcactt tccgacacat gtgtcgcttc 2340 tttacgtcgt ttcggagcga ttgttgtcga tgactcgtgc gttttcaatt ctgggcagag 2400 aatgattcct gctttagaaa gcgcattgaa agtcaaacca aatttcaatg ttactatagt 2460 tgatggtgtc gctggttgtg ggaaaacgac ccatctcaag cgtgtttcga ggtttgaatc 2520 aaacccagat ctcgtcttaa ctagtaatcg tagctctgct gatgagctca aggaaacatt 2580 gacttgttca gatgcgatga aataccgcat aagaactgtt gatagtttcc ttatgctgaa 2640 aaattggttt tctgccgaca gacttctgtt cgatgaatgc ttcttgacgc atgcgggatg 2700 tgtttatgca gccgcgtcat tagctcaggt taaggaagtt attgctcttg gtgataccga 2760 gcaagttccc tttatttcgc gattacctga gttccgcatg caacaccata agttatcagg 2820 aaagattgaa tgtcaaacga ccacttatag gtgcccaaga gatgccactt attgtttaaa 2880 aactcagttt tataaaacaa aatcagtgaa gacagcgagc gttgttgaac gctcgattga 2940 tttgatacca atcagtagtc ctatccagat accgtgtgaa gataatgttc tctatatcac 3000 acatacaaga gcagacaaag acgctcttat gaagattcct ggattcaata aatcgaatat 3060 aaagacgaca cacgaggctc agggtgacac ttgggataat gtcatcgcgt tccgtctatc 3120 taagacgacg aatcttttgc attctggtaa aggtcctgat ttaggatgtt gtcacaatct 3180 tgtagctata tccaga 3196 //