ID   FJ602697; SV 1; linear; genomic RNA; STD; VRL; 2157 BP.
XX
AC   FJ602697;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate AD-JJ segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2157
RA   Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.;
RT   "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus
RT   isolates in Korea and their phylogenetic relationships with Japan and China
RT   isolates";
RL   Plant Pathol. J. 25(2):142-150(2009).
XX
RN   [2]
RP   1-2157
RA   Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.;
RT   ;
RL   Submitted (01-JAN-2009) to the INSDC.
RL   Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro,
RL   Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
DR   MD5; 72650639d4a71716ec099fc0c9067f73.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2157
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="AD-JJ"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="putative SP"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:Q705B3"
FT                   /protein_id="ACR57046.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1246..2106)
FT                   /codon_start=1
FT                   /product="NSvc4"
FT                   /db_xref="GOA:B5B668"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:B5B668"
FT                   /protein_id="ACR57047.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2157 BP; 694 A; 436 C; 402 G; 625 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacaataga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gataacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctt ttcatcaaag tacacaaaca tataccagag       300
     ttttgtcact cattcttatc acacctgtta ggaggtgaag atgatgacaa tgctcttata       360
     gacattggtc tgtttttcaa catgttgcaa ccctctttgg gcggttggat aactaagaat       420
     tttcttagac accctaatag gatgtctaag gaccaaatta aaatgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aattatccaa cctcttctac acaaaacata gtttattgta       600
     tatcacattt tccacctatg agtgcttgca ttctagaagt ggagccagtt tgggttgacc       660
     ttcttgtatg aaaatacgag tatattatag tctaaacaat atacatgatg tttgtccact       720
     taagtttgac agtttgtaaa taattgtgtg tgattgtgcg tgtgtgtata tatgttaata       780
     taaaactgtg cacaggtgtg tagatatgaa cacttgaaac aaataaattt atatattcct       840
     atcaactcat atacatactt gtgagtctta gctcttctat atacacacat agaaacatga       900
     gagtatcata caagacccat tgcaaaaata ctaataactt tgtttttaca atgtcaaaac       960
     taaaaactga aataccaaaa acatgagaaa atagaaaatc aaaaacaatg aatggtgcta      1020
     agcaccacat ccggatgtgg tgcgtagcac cattttcata acattaatct ataacctact      1080
     agtggcaaaa acacccatac acatgaagtg catagcactc tcttatggat tgactactat      1140
     gagtacttga atgcatagca ttctcctgaa aaaaagcaga gaagaacaga ccacatcaag      1200
     tgcgtagcac taaatgttag catactccgg aactggttat ctcacctaca tgatgacaga      1260
     aacttcagat tttgatttct ttgtgatggg tatcttcttt ggctgcttca ccacaccgaa      1320
     ctccttctca gtgtctagct cagggaagct cttgctagtg aaagcacctc caacagcttt      1380
     ctgaacaaca ttagtcgtaa aattactgaa gctggacaaa tggtttatgg ccttatcttc      1440
     tagtggttca aattcaaaca tcacagtgtc attggtcttc atggacactg gcagatcagt      1500
     cctctcaatc ccccagaacc aaagagttct ggagatgaca cagttctgca ctgagctgtc      1560
     atcaacagat acggacactt gaagattatg cttatcctcc aaagccagaa aattcgctag      1620
     agaacccaag acagcaaaat tcttgctaat tgggtagcga acctctacct cgacttgatc      1680
     tgaggagttc acataggact tgtctattat gcggagggta gttattccac tagctctacc      1740
     cttaattcca atccaaacca tagcaaaagt tgccactcta aagaatgggt aatgggtgag      1800
     aggttgatga aaccaatatg gatcaacaag tatgttgaaa gttgctttcc tatgggcctt      1860
     cacagaatag tcttgtttgg ctatgaacat atcatacttg ttcaccttga catctgagaa      1920
     gctgaagggt tccaatccaa gcattgtggc agcttggtca atcgtaaccc taccctggtt      1980
     cagaggcctc ttggagagag ctagagattt cctattctta ttatctactc tcttttggga      2040
     ctcctcacta aggtcatcat agagtacctt actttttgaa gtggacaaaa gtcgagacaa      2100
     agccataatt aaagtatata ttagcttaat ctcaaaagat ataccctgac tgtgtgt         2157
//