ID   FJ602695; SV 1; linear; genomic RNA; STD; VRL; 2138 BP.
XX
AC   FJ602695;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate CY-CN segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2138
RA   Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.;
RT   "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus
RT   isolates in Korea and their phylogenetic relationships with Japan and China
RT   isolates";
RL   Plant Pathol. J. 25(2):142-150(2009).
XX
RN   [2]
RP   1-2138
RA   Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.;
RT   ;
RL   Submitted (01-JAN-2009) to the INSDC.
RL   Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro,
RL   Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
DR   MD5; 74fa7383588466cde12e0b8c63c02600.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2138
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="CY-CN"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="putative SP"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:D8L270"
FT                   /protein_id="ACR57042.1"
FT                   /translation="MQDVQRTVEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVYKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1228..2088)
FT                   /codon_start=1
FT                   /product="NSvc4"
FT                   /db_xref="GOA:D8L271"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:D8L271"
FT                   /protein_id="ACR57043.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRRATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKVVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2138 BP; 678 A; 439 C; 409 G; 612 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtgcaaa ggacagtaga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gataacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctt ttcatcaaag tttacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctctcata       360
     gacattggtc tgtttttcaa catgttgcaa ccctctttgg gcggttggat aaccaagaat       420
     tttcttagac accctaatag gatgtctaag gaccagatta aattgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aattatccaa cctcttctac acaagacata gtttattgca       600
     tatcatattt tccaccaacg agagcttgca ctctagaagt ggagccagtt tggattgacc       660
     ttcttgtatg aaaatacaag tatattatag tctaaacaat atacatgatg tttgtttact       720
     taagcttaac agtttgtaaa tacttgtgtg tgattgagcg tgtgcgtata tatgtattta       780
     tatataactg ttcacaggtg tgcagatgcg aacacttgaa acaaataaac aaatatatac       840
     ctatcaaatc atatacatgc ttgtgagtct tggctccttt acatacacac atacaagaac       900
     cattgcaaaa acactaacaa ctttggtttt acaatatcaa aaccaaaaac tgaaatacca       960
     aaaacatgag aaaatagaaa atcaaaaaca atgaatggtg ataagcacca catctggatg      1020
     tggtgcgtag caccattttc ataacattag tttataacct acttgtggca aaaacatcca      1080
     tatgcatgaa gtgcgtagca ccctgttatg gatcgaccag tataattacg tgaatgcata      1140
     gcattctgtt ggaaaaagca gagcagaaca gaccacatca agtgcgtagc actagatgct      1200
     agcatactct ggaactggtt atctcaccta catgatgaca gaaacttcag attttgattt      1260
     ctttgtgatg ggtatcttct ttggctgctt caccacaccg aactccttct cagtgtctag      1320
     ctcagggaag ctcttgctgg tgaaagcacc tccaacaact ttctgaacaa cattagtcgt      1380
     gaaattactg aagctggata aatggtttat tgccttatct tctagtggtt caaattcaaa      1440
     catcacagtg tcattggtct tcatggacac tggcagatca gtcctttcaa tcccccagaa      1500
     ccaaagagtt ctggagatga cacagttctg cactgagctg tcatcaacag atacggacac      1560
     ttgaagatta tgcttatcct ccaaagcaag aaaattcgct agagaaccca ggacagcaaa      1620
     attcttgcta attgggtagc gaacctctac ctcaacttga tctgaggagt tcacatagga      1680
     cttgtctatt atgcggaggg tagttattcc actagctcta cccttgattc caatccagac      1740
     catagcaaaa gttgccactc taaagaatgg ataatgggtg agaggttgat gaaaccaata      1800
     tggatcaaca agtatgttga aagttgctct cctatgggcc ttcacagaat agtcctgttt      1860
     ggctatgaac atgtcatact tgttcacctt gacatctgag aagctgaagg gctccaatcc      1920
     aagcattgtg gcagcttggt caatcgtaac cctaccctgg ttcagaggcc tcttggagag      1980
     agctaaagat ttcctattct tattatcaac tctcttttgg gactcctcac taaggtcatc      2040
     atagagtacc ttactttttg aagtggacaa aagtcgagac aaagccataa ttaaagtata      2100
     tattagctta atctcaaaga tatgccctga ctgtgtgt                              2138
//