ID   FJ602692; SV 1; linear; genomic RNA; STD; VRL; 2156 BP.
XX
AC   FJ602692;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate GC-JB segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2156
RA   Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.;
RT   "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus
RT   isolates in Korea and their phylogenetic relationships with Japan and China
RT   isolates";
RL   Plant Pathol. J. 25(2):142-150(2009).
XX
RN   [2]
RP   1-2156
RA   Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.;
RT   ;
RL   Submitted (01-JAN-2009) to the INSDC.
RL   Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro,
RL   Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
DR   MD5; bfb135bce877922b3cdbf7cfe79af463.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2156
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="GC-JB"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="putative SP"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:Q705B3"
FT                   /protein_id="ACR57036.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1245..2105)
FT                   /codon_start=1
FT                   /product="NSvc4"
FT                   /db_xref="GOA:D8L265"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:D8L265"
FT                   /protein_id="ACR57037.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGVERTDLPVSMKTSDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2156 BP; 696 A; 451 C; 400 G; 609 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacaataga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gaccgttagc gacaacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcaccacc ccttggagac tgataccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctcttata       360
     gacattggtc tgtttttcaa catgctgcaa ccctctttgg gcggttggat aaccaagaat       420
     tttcttagac accctaatag gatgtctaag gaccaaatta aaatgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt actttgaatc aattattcaa cctcttctac acaaaacata gcttattgca       600
     tatcacattt ttccacccac gagtgctagc attctaggag tggagccagt ttgggttgac       660
     cttcttgtgt gaagatacaa gtatattata gtctaaacaa tatacatgat gttttatcac       720
     ttaagcttga cagcttgtaa ataattgtat gtgattgtgc atgtgtatat atatgttaat       780
     acataactgt acacaggtgt gtagatgtaa acacttgaaa caaattaata aatatgtacc       840
     tatcaattca catacatact tgtgagtctt aactcctcta tatacacata gaaacatgag       900
     agtatcatac aagacccagt gcaaaaatac taataacttt gtttttacaa tgtcaaaact       960
     aaaaaccgaa ataccaaaaa cataagaaaa cagaaaatca aaaacaatga atggtgctaa      1020
     gcaccacatc cggatatggt gcgtagcacc attttcataa cattaatcta taacctacta      1080
     gtagcaaaaa cacccatatg catgaagtgc atagcactct cttatggatt gactactatg      1140
     attacgtgaa tgcatagcat tctcttggaa aaatgcagag caaaacagac cacatcaagt      1200
     gcgtagcact agatattggc atactccgga actggttatc tcacctacat gatgacagaa      1260
     acttcagatt ttgatttctt tgtgatgggt atcttcttcg gctgcttcac cacaccgaac      1320
     tccttctcag tgtctagctc aggaaagctc ttgctggtga aagcaccccc aacagctttc      1380
     tgaacaacat tagtcgtgaa attactgaag ctggacaaat ggtttatagc cttatcttct      1440
     agtggttcaa attcaaacat cacagtgtca ctggtcttca tggagactgg cagatcagtc      1500
     ctttcaactc cccagaacca aagagttcta gagatgacac agttctgcac tgagctgtca      1560
     tcaacagata cggacacttg aagattatgc ttatcctcca aagccaggaa attcgctaga      1620
     gaacccaaga cagcaaaatt cttgctaatt gggtagcgaa cctctacctc aacttgatct      1680
     gagggattca cataggactt gtctattatg cggagggtag ttattccact agctctaccc      1740
     ttaattccaa tccagaccat agcaaaagtt gccactctaa agaatgggta atgggtgaga      1800
     ggttgatgaa accaatatgg atcaacaagt atgttgaaag ttgctttcct atgggccttc      1860
     acagaatagt cctgtttggc tatgaacata tcatacttgt tcaccttgac atctgagaag      1920
     ctgaagggtt ccaatccaag cattgtggca gcctggtcaa tcgtgaccct accctggttc      1980
     agaggcctct tggagagagc tagagatttc ctattcttat tatcaactct cttttgggac      2040
     tcctcactaa ggtcatcata gagtacctta ctttttgaag tggacaaaag tcgagacaaa      2100
     gccataatta aagtatatat tagctaaatc tcaaaagata tgccctgact ttgtgt          2156
//