ID   FJ602691; SV 1; linear; genomic RNA; STD; VRL; 2140 BP.
XX
AC   FJ602691;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate IS-JB segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2140
RA   Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.;
RT   "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus
RT   isolates in Korea and their phylogenetic relationships with Japan and China
RT   isolates";
RL   Plant Pathol. J. 25(2):142-150(2009).
XX
RN   [2]
RP   1-2140
RA   Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.;
RT   ;
RL   Submitted (01-JAN-2009) to the INSDC.
RL   Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro,
RL   Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
DR   MD5; 1e65320a331a07ad54f5dd624bc89df5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2140
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="IS-JB"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="putative SP"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:D8L262"
FT                   /protein_id="ACR57034.1"
FT                   /translation="MQDVQRTVEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHSLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1229..2089)
FT                   /codon_start=1
FT                   /product="NSvc4"
FT                   /db_xref="GOA:D8L263"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:D8L263"
FT                   /protein_id="ACR57035.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRRATFNILVDPYWFHQPLT
FT                   YYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2140 BP; 686 A; 443 C; 401 G; 610 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacagtaga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gataacatta ctctacctga tttgaaagat       180
     ccagagagag tcacagaaga tactaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcatcact ccttggagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctctcata       360
     gatattggtc tgtttttcaa catgttgcaa ccctctttgg gcggttggat aaccaagaac       420
     tttcttagac accctaatag gatgtctaag gaccagatta aattgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aatcatacaa cctcttctgc acaagacata gtttgttgca       600
     tgtcgcattt tccaccaaag agagcttgca ctctagaagt tggagccagt ttgggttgac       660
     cttcttgtat gaaaatacaa gtatattata gtctaaacaa tatacatgat ggttgtttac       720
     ttaagcttga cagtttgtga ataatttgtg tgtgactgag cgtgtgtgta tatatgtatt       780
     aatatattac tgtacacagg tgtgcagatg caaacaccta aaacaaataa acaaatatat       840
     acctatcaaa tcatatacat gcttgtgagt cttggctcct ctacatacac acatacaaga       900
     acaattgcaa aaatactaat aactttgctt ttacaatatc aaaaccaaaa actgaaatac       960
     caaaaacatg agaaaataga aaatcaaaaa caatgaatgg tgctaagcac cacatccgga      1020
     tgtggtgcgt agcaccattt tcataacatt agtctataac ctacttgtgg caaaaacacc      1080
     catatgcatg aagtgcatag cactctctta tggattgacc actataatta cgtgaatgca      1140
     tagcattctc ttaaaaaaat agagcagaac agaccacatc aagtgcgtag cactagatgc      1200
     tagcatactc tggaactggt tatctcacct acatgatgac agaaacttca gattttgatt      1260
     tctttgtgat gggtatcttc tttggctgct tcaccacacc aaactccttc tcagtgtcta      1320
     gctcagggaa gctcttgctg gtgaaagcac ctccaacagc tttctgaaca acattagtcg      1380
     tgaaattact gaagctggac aaatggttta ttgccttatc ttctagtggt tcaaattcaa      1440
     acatcacagt gtcattggtc ttcatggaca ctggcagatc agtcctttca atcccccaga      1500
     accaaagagt tctagagatg acacagttct gcactgagct gtcatcaaca gatacggaca      1560
     cttgaagatt atgcttatcc tccaaagcca gaaaattcgc tagagaaccc aagacagcaa      1620
     aattcttgct aattgggtag cgaacctcta cctcaacttg atctgaggag ttcacatagg      1680
     acttatctat tatgcggagg gtagttattc cactagctct acccttgatt ccaatccaga      1740
     ccatagcaaa agttgccact ctgaagaatg gataataggt gagaggttga tgaaaccaat      1800
     atggatcaac aagtatgttg aaagttgctc tcctatgggc cttcacagaa tagtcctgtt      1860
     tggctatgaa catatcatac ttgttcacct tgacatctga gaagctgaag ggttccaatc      1920
     caagcattgt ggcagcttgg tcaatcgtaa ccctaccctg gttcagaggc ctcttggaga      1980
     gagctaaaga tttcctattc ttattatcaa ctctcttttg ggactcctca ctaaggtcat      2040
     catagagtac cttacttttt gaagtggaca aaagtcgaga caaagccata attaaagtat      2100
     atattagctt aatctcaaaa gatatgccct gactgtgtgt                            2140
//