ID   FJ602690; SV 1; linear; genomic RNA; STD; VRL; 2141 BP.
XX
AC   FJ602690;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate GS-JB segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2141
RA   Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.;
RT   "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus
RT   isolates in Korea and their phylogenetic relationships with Japan and China
RT   isolates";
RL   Plant Pathol. J. 25(2):142-150(2009).
XX
RN   [2]
RP   1-2141
RA   Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.;
RT   ;
RL   Submitted (01-JAN-2009) to the INSDC.
RL   Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro,
RL   Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
DR   MD5; 50e50fb47030957701eab937b8b89653.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2141
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="GS-JB"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="putative SP"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:D8L260"
FT                   /protein_id="ACR57032.1"
FT                   /translation="MQDVQRTVEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLVLKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1230..2090)
FT                   /codon_start=1
FT                   /product="NSvc4"
FT                   /db_xref="GOA:D8L261"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:D8L261"
FT                   /protein_id="ACR57033.1"
FT                   /translation="MALSRLLSTSKSNVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRRATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2141 BP; 682 A; 447 C; 404 G; 608 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacagtaga agtttcggtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gataacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctagtactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa cgctctcata       360
     gacattggtt tgtttttcaa catgttgcaa ccctctttgg gcggttggat aaccaagaat       420
     tttcttagac accctaatag gatgtctaag gaccagatca aattgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aattatccaa cctcttctac acaaaacata gtttattgca       600
     tatcacattt tacacccacg agagcttgca ttctagaagt ggagccagtt tgagttgacc       660
     ttcttgtatg aaaatacgag tatatattat agtctaaaca taatacatga tgtttgtcca       720
     cttaagcttg acagtttgta aataattgtg tgtgattgtg cgtgtgtgta tatatgtatt       780
     aatatataac tgtacacagg tgtgcagatg caaacacctg aaacaaataa acaaatatat       840
     acctacctaa tcatatacat gcttgtgagt cttggctcct ttgcatacac acatacaaga       900
     accattgcaa aaatactaat aactttgctt ttacaatatc aaaaccaaaa actgaaatac       960
     caaaaacatg agaaaataga aaatcaaaaa caatgaatgg tgctaagcac cacatccgga      1020
     tgtggtgcgt agcaccattt tcataacatt agtctataac ctacttgtgg caaaaacacc      1080
     catatgcatg aagtgcatag cactctctta tggattgacc actataatta cgtgaatgca      1140
     tagcattctc ttgaaaaaag cagagcagaa cagaccacat caagtgcgta gcactagatg      1200
     ctagcatact ctggaactgg ttatctcacc tacatgatga cagaaacttc agattttgat      1260
     ttctttgtga tgggtatctt ctttggctgc ttcaccacac cgaactcctt ctcagtgtct      1320
     agctcaggga agctcttgct agtgaaagca cctccaacag ctttctgaac aacattagtc      1380
     gtgaaattac tgaagctgga caaatggttt attgccttat cttctagtgg ttcaaactca      1440
     aacatcacag tgtcattggt cttcatggac actggtagat cagtcctttc aatcccccag      1500
     aaccaaagag ttctagagat gacacagttc tgcactgagc tgtcatcaac agatacggac      1560
     acttgaagat tgtgcttatc ctccaaagcc agaaaattcg ctagagaacc caagacagca      1620
     aaattcttgc taattgggta gcgaacctct acctcaactt gatctgagga gttcacatag      1680
     gacttgtcta ttatgcggag ggtagttatt ccactagctc tacccttgat tccaatccag      1740
     accatagcaa aagttgccac tctaaagaat ggataatggg tgagaggttg atgaaaccaa      1800
     tatggatcaa caagtatgtt gaaagttgct ctcctatggg ccttcacaga atagtcctgt      1860
     ttggctatga acatatcata cttgttcacc ttgacatctg agaagctgaa gggttccaat      1920
     ccaagcattg tggcagcttg gtcaatcgta accctaccct ggttcagagg cctcttggag      1980
     agagctaaag atttcctatt cttattatca actctctttt gggactcctc actaaggtca      2040
     tcatagagta cgttactttt tgaagtggac aaaagtcgag acaaagccat aattaaagta      2100
     tatattagct taatctcaaa agatatgccc tgactgtgtg t                          2141
//