ID   FJ602689; SV 1; linear; genomic RNA; STD; VRL; 2157 BP.
XX
AC   FJ602689;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate BA2-JB segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2157
RA   Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.;
RT   "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus
RT   isolates in Korea and their phylogenetic relationships with Japan and China
RT   isolates";
RL   Plant Pathol. J. 25(2):142-150(2009).
XX
RN   [2]
RP   1-2157
RA   Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.;
RT   ;
RL   Submitted (01-JAN-2009) to the INSDC.
RL   Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro,
RL   Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
DR   MD5; 2a120884fe5599d6ab3e37fe89dc89ef.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2157
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="BA2-JB"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="putative SP"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:Q705B3"
FT                   /protein_id="ACR57054.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1246..2106)
FT                   /codon_start=1
FT                   /product="NSvc4"
FT                   /db_xref="GOA:D8L259"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:D8L259"
FT                   /protein_id="ACR57055.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGVERTDLPVSMKTSDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNAVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2157 BP; 688 A; 442 C; 408 G; 619 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacaataga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gacaacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctaatactca agggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgataccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctcttata       360
     gacattggtc tgtttttcaa catgctgcaa ccctctttgg gtggttggat aaccaagaat       420
     tttcttagac accctaatag gatgtctaag gaccaaatta aaatgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagaat atgagaaagt gtggaagaag       540
     atgccaactt actttgaatc aattattcaa cctcttctac acaaaacata gcttattgca       600
     tatcacattt tttccaccca cgagtgcttg cattctagaa gtgaagccag tttgggttga       660
     ccttcttgtg tgaagataca agtatattat agcctaaaca atgtacatga tgttttatca       720
     cttaagcttg acagcttgtg aataattgtg tgtgattgtg tgtgtgtaca tatatgttaa       780
     tatataacta tacacaggtg tgtagatgta aacacttgaa acaattaaat aaatatatac       840
     ctatcaattc atatacatac ttgtgagtct tagctcctct atatacacat agaaacatga       900
     gagtatcata caagacccag tgcaaaaata ctaataactt tgtttttaca atgtcaaaac       960
     taaaaactga aataccaaaa gcatgagaaa atagaaaatc aaaaacaatg aatggtgcta      1020
     agcaccacat ccggatgtgg tgcgtagcac cattttcata acattaatct ataacctact      1080
     agtagcaaaa acacccatat gcatgaagtg catagcactc tcctatggat tgactactat      1140
     gattacgtga atgcatagca ttctcttgga aaaatgcaga gcaaaacaga ccacatcaag      1200
     tgcgtagcac tagatgttgg catgctccgg aactggttat ctcacctaca tgatgacaga      1260
     aacttcagat tttgatttct ttgtgatggg tatcttcttt ggctgcttca ccacaccgaa      1320
     ctccttctca gtgtctagct caggaaagct cttgctggtg aaagcacctc caacagcttt      1380
     ctgaacagca ttagtagtga aattactgaa gctggacaaa tggtttatag ccttatcttc      1440
     tagtggttca aattcaaaca tcacagtgtc actggtcttc atggagactg gcagatcagt      1500
     cctttcaact ccccagaacc aaagagttct agagatgaca cagttctgca ctgagctgtc      1560
     atcaacagat acggacactt gaagattatg cttatcctcc aaagccagga aattcgctag      1620
     agaacccaag acagcaaaat tcttgctaat tgggtagcga acctctacct caacttgatc      1680
     tgagggattc acataggact tgtctattat gcggagggta gttattccac tagctctacc      1740
     cttaattcca atccagacca tagcaaaagt tgctactcta aagaatgggt aatgggtgag      1800
     aggttgatga aaccaatatg gatcaacaag tatgttgaaa gttgctttcc tatgggcctt      1860
     cacagaatag tcctgtttgg ctatgaacat atcatacttg ttcaccttga catctgagaa      1920
     gctgaagggt tccaatccaa gcattgtggc agcctggtca atcgtgaccc taccctggtt      1980
     cagaggcctc ttggagagag ctagagattt cctattctta ttatcaactc tcttttggga      2040
     ctcctcacta aggtcatcat agagtacctt actttttgaa gtggacaaaa gtcgagacaa      2100
     agccataatt aaagtatata ttagcttaat ctcaaaagat atgccctgac tgtgtgt         2157
//