ID   FJ602688; SV 1; linear; genomic RNA; STD; VRL; 2155 BP.
XX
AC   FJ602688;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate BA1-JB segment RNA4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2155
RA   Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.;
RT   "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus
RT   isolates in Korea and their phylogenetic relationships with Japan and China
RT   isolates";
RL   Plant Pathol. J. 25(2):142-150(2009).
XX
RN   [2]
RP   1-2155
RA   Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.;
RT   ;
RL   Submitted (01-JAN-2009) to the INSDC.
RL   Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro,
RL   Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
DR   MD5; 92c75d2928e055418b4e536354ae097f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2155
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA4"
FT                   /isolate="BA1-JB"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="putative SP"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ICC6"
FT                   /protein_id="ACR57030.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1244..2104)
FT                   /codon_start=1
FT                   /product="NSvc4"
FT                   /db_xref="GOA:Q52R52"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:Q52R52"
FT                   /protein_id="ACR57031.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2155 BP; 684 A; 446 C; 405 G; 620 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacaataga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gacaacatta ccctacctga tttgaaagat       180
     ccagagagag tcacggaaga taccaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctcttata       360
     gacattggtc tgtttttcaa catgttgcaa ccctctttgg gcggttggat aaccaagaat       420
     tttcttagac accctaatag gatgtctaag gaccaaatta aactgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aattatccaa cctcttctac acaaaacata gtttattgca       600
     tatcacattt tctacccacg agtgcttgca ttctagaagt ggagccagtt tgggttgacc       660
     ttcttgtatg aaaatgcgag tatatattat agtcaaaaca atatgcatga tgtttgtcca       720
     cttaagcttg acagtttgta aataattgtg tgtgattgtg tgtgtgtgta tatatgttaa       780
     tatataactg tgcacaggtg tgtggatata aacacttgaa acaaataaat taatatattc       840
     ccattaactc atatacatac ttgtgagtct tagctcctct atatacatac atagaaacat       900
     gagagtatca tacaagaccc attgcaaata ctaataactt tgttttacaa tatcaaaact       960
     aaaactgaaa taccaaaaac atgagaaaat agaaaatcaa aaacaatgaa tggtgctaag      1020
     caccacatcc ggatgtggtg cgtagcacca tttccataac attaatctat aacctactag      1080
     tagcaagaac acccatatgc atgaagtgca tagcactctt ttatggattg actactatga      1140
     ttacgtgaat gcatagcatt ctcctggaaa aaagcagagc agaacagacc acatcaagtg      1200
     cgtagcacta gatgttagca tactccggag ctggttatct cacctacatg atgacagaaa      1260
     cttcagattt tgacttcttt gtaataggta tcttctttgg ctgcttcact acaccgaact      1320
     ccttctcagt gtctagctca gggaagctct tgctggtgaa ggcaccccca acagctttct      1380
     gaacaacatt agtcgtaaaa ttactgaagc tggacaaatg gtttatggcc ttatcttcta      1440
     gtggttcaaa ctcaaacatc acagtgtcat tggtcttcat ggatactggc agatcagtcc      1500
     tctcaatccc ccagaaccaa agagttctag agatgacaca gttctgcact gagctgtcat      1560
     caacagatac tgacacttga agattatgct tatcctccaa agccagaaaa ttcgctagag      1620
     aacccaagac agcaaaattc ttgctaattg ggtagcgaac ctctacctca acttgatctg      1680
     aggggttcac ataggacttg tctattatgc ggagggttgt tattccacta gctctaccct      1740
     taattccaat ccaaaccata gcaaaagttg ccactctaaa gaatgggtaa tgggtgagag      1800
     gttgatgaaa ccaatatgga tcaacaagta tgttgaaagt tgctttccta tgggccttca      1860
     cagaatagtc ctgtttggct atgaacatat catacttgtt caccttgaca tctgagaagc      1920
     tgaagggctc caatccaagc attgtggcag cttggtcaat cgtaacccta ccttggttca      1980
     gaggcctctt ggagagagct agtgatttcc tattcttatt atcaactctc ttttgggact      2040
     cctcactaag gtcatcatag agtaccttac tttttgaagt ggacaaaagt cgagacaaag      2100
     ccataattaa agtatatatt agcttaatct caaaagatat gccctgactg tgtgt           2155
//