ID FJ602687; SV 1; linear; genomic RNA; STD; VRL; 2491 BP. XX AC FJ602687; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate YG-JN segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2491 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2491 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; a327a9a09ce2311672ef6755409f248a. XX FH Key Location/Qualifiers FH FT source 1..2491 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="YG-JN" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2008" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:O10387" FT /protein_id="ACR57028.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1431..2399) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57029.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2491 BP; 774 A; 526 C; 431 G; 760 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaaaaaagaa 720 aaaaagaaaa aagaaaataa aacgaataat caaaaaaaca aaaaaatctt aaaaatgaaa 780 aacacaaaaa aaccaaaaaa ctaaaaaaac taaaaaaact aaaaaacatc atgacctagg 840 aaactgcaca ccactggttg tctagtgggc tctagttggt agagaaagct atgcttttgc 900 ctaaagccat gattggccaa tccttaaaat gtgctaagca cattatccga agatgtctcg 960 gatgtttttt tacctaacct aatttttttg tatttttata tgattttttg atttttttgt 1020 attttatata catatttttg tttttgattt ttttgttttt taatattttt tcttctaatt 1080 actacattaa tatatttgat tattcatata cttaaaatat atagtatgta ttataaaaat 1140 agagtaatat aataaagcta gtaaaactac ataacaagca tatatctaaa tatttagata 1200 gacttatcaa actaaagact ctactagaga gtgagtaata ataatggcaa tacatcacac 1260 acaaagccca aaaccacaca gacaaaataa cttatggaat ataattaaaa actaaaatat 1320 acacatataa atatacatat taacttacac ctaaagaaac aacacactgt ttgaagacat 1380 gcatcttcca gggagatatg aaatccccca caactactga cttgttcagt ctagtcatct 1440 gcaccttctg cctcgtcctc gaagaactcc ttcaccaacc cgctgacttc agatgctgtc 1500 tttgaagtgt tctcagcaag gatcttcatc agtttgctct gttgagccaa gtacagcctt 1560 gtctgattcc cataagtgct gatcgtattg acagacatac cagccagcgc atcgaagatt 1620 gtggtcttca ctttcccatt ggtgatgaat tcatctaaga ccttcttcct accatcttcc 1680 ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaggagacc agttgtgtac 1740 ttcatcatgt ctatgtcttt tgtcagacca cgctccttct tcttaccctc tggcatggtc 1800 tttttggtta tttggaagga gtgaatgatg tgcacaacaa acaaaatgtg acttagggag 1860 tgagttgtgc agtaaggagc tgtttcactc tccagtttga tatattgtgg aacatagtcc 1920 cacagtaagt tatcacatcc tgttagtccc aggtcagagg agtccacagc catcttaaca 1980 ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc cagccttcca 2040 agtgtgatag cattggcatt tgtccccacc gaggacacta tcccatacct cgacaccaag 2100 gtcgaagcct ctgtgcttcc agccgccact ttcactttct tagtgacatc tctcacaaag 2160 ccagtgcctc tcacatatct catggtgatg cacatagtca tatccttggc cagtgtgtca 2220 ccacctttgt ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc 2280 tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa cgcatctttg 2340 gagatgtcat tgattgcctt ctgcaaatca gctagagtgg ctggcttgtt ggtgcccatt 2400 gtagcaagag gtactggagg aatggttgcg gcttagatga aatttggaat gtaaaagcaa 2460 aatcgaaaat tttattaccc agactttgtg t 2491 //