ID FJ602686; SV 1; linear; genomic RNA; STD; VRL; 2481 BP. XX AC FJ602686; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate WD-JN segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2481 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2481 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; 4d389df0d2c66c169f85aa2ce8096506. XX FH Key Location/Qualifiers FH FT source 1..2481 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="WD-JN" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2008" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:O10387" FT /protein_id="ACR57026.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1421..2389) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57027.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2481 BP; 767 A; 523 C; 431 G; 760 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag caagaaaagg cataagtatg 600 tcatttcttc cgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa agaaaaaaga 720 gaaaaaagaa aataaaacaa ataatcaaaa aaacacaaaa aaatcttaaa aatgaaaaac 780 acaaaaaaac caaaaaacta caaaaactaa aaaacattat gaccttagaa actgcacacc 840 actggttgtc tagtgggctc tagttggtag agaaagctat gcttttgcct aaagccatga 900 ttggccaatc cttaaaatgt gctaagcaca ttatccgaag atgtctcgga tgttttttta 960 cctaacctaa tttttttgta tatttatata attttttgat ttttttgtat tttatataca 1020 tatttttgtt ttttgatttt tttgtttttt taatattttt tcttctaatt actacattaa 1080 tatacttgat tattcatata cttaaaatat atagtatgta ttataaaaat agagcaatat 1140 aataaagcta gtataactac attacaaaca tatatctaaa tatttagata gacttatcaa 1200 actaaagact ctactagaga gtgagtaata ataatggcaa tacatcacaa acaaagccca 1260 aaaccacaca gacaaaataa cttatggaat ataattaaaa actaaaatat acacatataa 1320 atatacatgt taacttacac ctaaagaaac aaaaaacggt ttgaagacat gcatcttcca 1380 gggagatatg agatccccaa caactactga cttgttcagt ctagtcatct gcaccttctg 1440 cctcgtcctc gaagaactcc ttcaccaacc cgctgacttc agatgctgtc tttgaagtgt 1500 tctcagcaag gatcttcatc agtttgctct gttgagccaa gtacagcctt gtctgattcc 1560 cataagtgct gatcgtattg acagacatac cagccagcgc atcgaagatt gtggtcttca 1620 ctttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc ttcttcttgt 1680 cagcaaggtt ctttgacttg catgtgatga ccaggagacc agttgtgtac ttcatcatgt 1740 ctatgtcttt tgtcagacca cgctccttct tcttaccctc tggcatggtc tttttggtta 1800 tttggaagga gtgaatgatg tgcacaacaa acaaaatgtg acttagggag tgagttgtgc 1860 agtaaggagc tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt 1920 tatcacatcc tgttagtccc aggtcagagg agtccacagc catcttaaca ccagaaattt 1980 gtctcacaac ttcatgtgag acatttggga atagctgagc cagccttcca agtgtgatag 2040 cattggcatt tgtccccacc gaggacacta tcccatacct cgacaccaag gtcgaagcct 2100 ctgtgcttcc agccgccact ttcactttct tagtgacatc tctcacaaag ccagtgcctc 2160 tcacatatct catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt 2220 ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc tgaccagcaa 2280 aggtcacaac atcagcttta tgagcagtca ggtaagacaa agcatctttg gagatgtcat 2340 tgattgcctt ctgcaaatca gctagagtgg ctggcttgtt ggtgcccatt gtagcaagag 2400 gtactggagg aatggttgcg gcttagatga aatttggaat gtaaaagcaa aatcgaaaat 2460 tttattaccc agactttgtg t 2481 //