ID FJ602685; SV 1; linear; genomic RNA; STD; VRL; 2472 BP. XX AC FJ602685; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate SA-JN segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2472 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2472 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; 349d83bae6296fa456aa83e75ab7848a. XX FH Key Location/Qualifiers FH FT source 1..2472 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="SA-JN" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2008" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:D8L250" FT /protein_id="ACR57024.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEHRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSIKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1412..2380) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57025.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2472 BP; 756 A; 531 C; 427 G; 757 T; 1 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtag gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta catatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gcacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtatcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaaaaaagaa 720 aaaagaaaat aaaacaaata atcaaaaaaa caaaaaaatc ttaaaaatga taaacaaaaa 780 aaccaaaaaa ctaaaaaaac taaaaaacat caagacctaa gaaactgcac accactggtt 840 gtctagtggg ctctagttgg tagagaaagc tatgcttttg cctaaagcca tgattggcca 900 atccttaaaa tgtgctaagc acattatccg aagatgtctc ggatgttttt ttacctaacc 960 taattttttt gtatttttat ataatttttt gatttttttg tactttatat acatattttt 1020 gttttttgat ttttttgttt tttaatactt tttcttctaa ttactacatt aatatatttg 1080 attattcata tacttaaaat atatagtatg tattataaaa atagagcaat ataataaagc 1140 tagtataact acattacaaa cctttatcta aacatttaga tagacttatc aaactaaaga 1200 ctctactaga gagtgagtaa taataatggc aatacatcac acacaaagcc caaaaccaca 1260 cagactaaat aacttatgga acataattaa aaactaaaat atacacgtat aatatactta 1320 ttaacttaca cctagagaaa caacaaacdg tttgaagaca tgcatcttcc agggagatat 1380 gagatccccc acaactactg actagttcag tctagtcatc tgcaccttct gcctcgtcct 1440 cgaagaactc cttcaccaac ccgctgactt cagatgctgt ctttgaagtg ttctcagcaa 1500 ggatcttcat cagtttgctc tgttgagcca agtacagcct tgtctgattc ccataagtgc 1560 tgatcgtatt gacagacata ccagccagcg catcgaagat tgtggtcttc actttcccat 1620 tggtgatgaa ttcatctaag accttctttc tgccatcttc cttcttcttg tcagccaggt 1680 tctttgactt gcatgtgatg accaggagac cagttgtgta cttcatcatg tctatgtctt 1740 ttgtcagacc acgctccttc ttcttaccct ctggcatggt cttcttggtt atttggaagg 1800 agtgaatgat gtgcacaaca aacaaaatgt gacttaggga gtgagttgtg cagtaaggag 1860 ctgtttcact ctccagtttg atatattgtg gaacatagtc ccacagtaag ttgtcacatc 1920 ctgttagtcc caggtcagag gagtccacag ccatcttaac accagaaatt tgtctcacaa 1980 cttcatgtga gacatttggg aatagctgag ccagccttcc aagtgtgata gcattggcat 2040 ttgtccccac cgaggacact atcccatacc tcgacaccaa agtcgaagcc tctgtgcttc 2100 cagccgccac tttcactttc ttagtgacat ctctcacaaa gccagtgcct ctcacatatc 2160 tcatggtgat gcacatagtc atatccttgg ccagtgtgtc accacctttg tccttcaata 2220 tgccaatcag agttgcagca tcatagcctg catactctat ctgaccagca aaggtcacaa 2280 catcagcttt atgagcagtc aggtaagaca acgcatcttt ggagatgtca ttgattgcct 2340 tctgcaaatc agctagagtg gctggcttgt tggtgcccat tgtagcaaga ggtactggag 2400 gaatggttgc ggcttagatg aaatttggaa tgtaaaagca aaatcgaaaa ttttattacc 2460 cagacttttt gt 2472 //