ID FJ602684; SV 1; linear; genomic RNA; STD; VRL; 2478 BP. XX AC FJ602684; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate AD-JJ segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2478 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2478 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; 5e81647f5fa17a1b3d99da82ab8ab403. XX FH Key Location/Qualifiers FH FT source 1..2478 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="AD-JJ" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:O10387" FT /protein_id="ACR57022.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1418..2386) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57023.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2478 BP; 766 A; 527 C; 427 G; 758 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gaacatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc ttccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacatcg tgccaatatc tgaccatgat ggaaagccgg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta aaaataaaaa agaaaaaaga 720 aaaaaagaaa taaaacaaat aatcaaaaaa acacaaaata atcttaaaaa tgaaaaacac 780 aaaaaaacca aaaaactaaa aaaactaaaa aacatcatga cctaagaaac tgcacaccac 840 tggttgtcta gtgggctcta gttggtagag aaagctatgc ttttgcctaa agccatgatt 900 ggccaatcct taaaatgtgc taagcacatt atccgaagat gtctcggatg tttttttacc 960 taacctaatt tttttgtatt tttatataat tttttgattt ttttgtattt tatatacata 1020 tttttgtttt ttgatttttt tgttttttaa tattttttct tataactact acattaatat 1080 atttgattat taacatactt aaaatatata gtatgtatta taaaaataga gcaatataat 1140 aaagctagta taactacatt acaaacatat atctaaatat ttagatagac ttatcaaact 1200 aaagactcta ctagagagtg agtaataata atggcaatac atcacacaca aagcccaaaa 1260 ccacacagac aaaataactt atggaatata attaaaaact aaaatataca catacaaata 1320 tacatattaa cttacaccta aagaaacaac acactgtttg aagacaagca tcttccaggg 1380 agatatgaga tcccccacaa ctactgactt gttcagtcta gtcatctgca ccttctgcct 1440 cgtcctcgaa gaactccttc accaacccgc tgacttcaga tgctgtcttt gaagtgttct 1500 cagcaaggat cttcatcagt ttgctctgtt gagccaagta cagccttgtc tgattcccat 1560 aagtgctgat cgtattgaca gacataccag ccagcgcatc gaagattgtg gtcttcactt 1620 tcccattggt gatgaattca tctaagacct tctttctgcc atcttccttc ttcttgtcag 1680 ccaggttctt tgacttgcat gtgatgacca ggagaccagt tgtgtacttc atcatgtcta 1740 tgtcttttgt cagaccacgc tccttcttct taccctctgg catggtcttt ttggttattt 1800 ggaaggagtg aatgatgtgc acaacaaaca aaatgtgact tagggagtga gttgtgcagt 1860 aaggagctgt ttcactctcc agtttgatat attgtggaac atagtcccac agtaagttgt 1920 cacatcctgt tagtcccagg tcagaggagt ccacagccat cttaacacca gaaatttgtc 1980 tcacaacttc atgtgagaca tttgggaata gctgagccag ccttccaagt gtgatagcat 2040 tggcatttgt ccccaccgag gacactatcc catacctcga caccaaagtc gaagcctctg 2100 tgcttccagc cgccactttc actttcttag tgacatctct cacaaagcca gtgcctctca 2160 catatctcat ggtgatgcac atagtcatat ccttggccag tgtgtcacca cctttgtcct 2220 tcaatatgcc aatcagagtt gcagcatcat agcctgcata ctctatctga ccagcaaagg 2280 tcacaacatc agctttatga gcagtcaggt aagacaacgc atctttggag atgtcattga 2340 ttgccttctg caaatcagct agagtggctg gcttgttggt gcccattgta gcaagaggta 2400 ctggaggaat ggttgcggct tagatgaaat ttggaatgta aaagcaaaat cgaaaatttt 2460 attacccaga ctttgtgt 2478 //