ID FJ602683; SV 1; linear; genomic RNA; STD; VRL; 2495 BP. XX AC FJ602683; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate SC-CN segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2495 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2495 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; f43a2cb450caf5f585548ddab393c732. XX FH Key Location/Qualifiers FH FT source 1..2495 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="SC-CN" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:D8L246" FT /protein_id="ACR57020.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSFY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSIALEPSPGSSPAVL" FT CDS complement(1435..2403) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57021.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2495 BP; 776 A; 525 C; 425 G; 769 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctcttcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ctccattgat gagcatcaat 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactt 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc cttctatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actttatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctattg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaagaaaaag 720 gaaaaaagaa aataaaacaa ataatcaaaa aaacaaaaaa atcttaaaaa tgaaaaacac 780 aaaaaaacta aaaacctaaa aaaactaaaa aaactaaaaa aactaaaaac atcattacct 840 aaaaaactgc acaccactgg ttgtctagtg ggctctagtt ggtagagaaa gctatgcttt 900 tgcccaaagc catgattggc caatccttaa aatgtgctaa gcacattatc cgaagatgtc 960 tcggatgttt ttttacctaa cctaattttt ttgtattttt atataatttt ttgatttttt 1020 tgtattttat atacacattt ttgatttttt gatttttttg ttttttaata tgttttcttc 1080 taattactac agtaatatat ttgattattc atatacttaa aatatataat atgtattata 1140 aaaatagagc aatataataa agctagtata actatattac aaacatatat ctaaatattt 1200 agatagactt atcaaactaa agactctact agagagtgag caataataat ggcagtacat 1260 cacacacaaa gcccagaacc acacagacaa aataacttat ggaatataat taaaaactaa 1320 aatatatata ttaaatacac atattaactt acacctaaag aaacaacaca ctgtttgaag 1380 acatgcgtct tccagggaga tatgagatcc cccactacta ctgacttgtt cagtctagtc 1440 atctgcacct tctgcctcat cctcgaagaa ctccttcacc aacccgctga cttcagatgc 1500 agtctttgaa gtgttctcag caaggatctt catcagcttg ctctgttgag ccaaatacag 1560 ccttgtctga ttcccataag tgctgatcgt attgacagac ataccagcca gcgcatcgaa 1620 gattgtggtc ttcactttcc cattggtgat gaattcatct aagaccttct ttctgccatc 1680 ttccttcttc ttgtcagcca ggttctttga cttgcatgtg atgaccagga gaccagttgt 1740 atacttcatc atgtctatat cttttgtcag accacgctct ttcttcttac cctctggcat 1800 ggtcttcttg gttatttgga aggagtgaat gatgtgcaca acaaacaaaa tgtgacttag 1860 ggagtgagtt gtgcagtaag gagctgtttc actctccagt ttgatatatt gtggaacata 1920 gtcccacagt aagttgtcac atcctgttag tcctaggtca gaagagtcca cagccatctt 1980 aacaccagaa atttgtctca caacttcatg tgagacattt gggaatagct gagccaacct 2040 tccaagtgtg atggcattgg catttgttcc caccgaggat actatcccat acctcgacac 2100 caaggtcgaa gcctctgtgc ttccagccgc cactttcact ttcttagtga catctctcac 2160 aaagccagtg cctctcacat atctcatggt gatgcacata gtcatatcct tggccagtgt 2220 gtcaccacct ttgtccttca atatgccaat cagagttgca gcatcatagc ctgcatactc 2280 tatctgacca gcaaaggtca caacatcagc tttatgagca gtcaggtaag acaacgcatc 2340 tttggagatg tcattgattg ccttctgcaa atcagctaga gtggctggct tgttggtgcc 2400 cattgtagca agaggtactg gaggaatggt tgcggcttag atgaaatttg gaatgtaaaa 2460 gcaaaatcga aaattttatt acccagactt tgtgt 2495 //