ID FJ602681; SV 1; linear; genomic RNA; STD; VRL; 2472 BP. XX AC FJ602681; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate JD-JN segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2472 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2472 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; 3cb16c18021998d0510233527d1e4a62. XX FH Key Location/Qualifiers FH FT source 1..2472 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="JD-JN" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:D8L242" FT /protein_id="ACR57016.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGISPAVL" FT CDS complement(1412..2380) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57017.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2472 BP; 752 A; 526 C; 430 G; 764 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc atctctccag ctgtgctgta gaaattaaaa gaaaaaagaa 720 aaaagaaaat aaaacaaata atcaaaaaac aaaaaaatct taaaaatgaa aaacaaaaaa 780 accaaaaaac taacaaaact aaaaaacatc atgacctaaa aacctgcaca ccactggttg 840 tctagtgggc tctagttggt agagaaagct atgcttttgc ctaaagccat gattggccaa 900 tccttaaaat gtgctaagca cattatccga agatgtctcg gatgtttttt tacctaacct 960 aatttttttg tatttttata taattttttg atttttttgt attttatata catatttttg 1020 gtttttgatt tttttgtttt ttaatatttt ttcttctaat tactacttta atatatttga 1080 ttattcatat acttaaaata aatagtatgt attataaaag tagagcaata taataaagct 1140 agtataacta cattacaaac atatatctaa atatttagat agacttatca aactaaagac 1200 tctactagag agtgagtaat aataatggca atacatcaca cacaaagccc agaaccacac 1260 agacaaaata acttatggaa tataatttaa aactaaaata tacacatata aatatacata 1320 ttaacttaca cctaaagaaa caacacactg tttgaagaca tgcatcttcc agggagatat 1380 gagatccccc acgactactg acttgctcag tctagtcatc tgcaccttct gcctcgtcct 1440 cgaagaactc cttcaccaac ccgctgactt cagatgctgt ctttgaagtg ttctcagcaa 1500 ggatcttcat cagtttgctc tgttgagcca agtacagcct tgtctgattc ccataagtgc 1560 tgatcgtatt gacagacata ccagccagcg catcgaagat tgtggtcttc actttcccat 1620 tggtgatgaa ttcatctaag accttctttc tgccatcttc cttcttcttg tcagccagat 1680 tctttgactt acatgtgatg accaggagac cagttgtgta cttcatcatg tctatgtctt 1740 ttgtcagacc acgctccttc ttcttaccct ctggcatggt ctttttggtt atttggaagg 1800 agtgaatgat gtgcacaaca aacaaaatgt gacttaggga gtgagttgtg cagtagggag 1860 ctgtttcact ctccagtttg atatattgtg gaacatagtc ccacagtaag ttgtcacatc 1920 ctgttagtcc caggtcagag gagtccacag ccatcttaac accagaaatt tgtctcacaa 1980 cttcatgtga gacatttggg aatagctgag ccagccttcc aagtgtgata gcattggcat 2040 ttgtccccac cgaggacact ataccatacc tcgacaccaa ggtcgaagcc tctgtgcttc 2100 cagccgccac tttcactttc ttagtgacat ctctcacaaa gccagtgcct ctcacatatc 2160 tcatggtgat gcacatagtc atatccttgg ccagtgtgtc accacctttg tccttcaata 2220 tgccaatcag agttgcagca tcatagcctg catactctat ctgaccagca aaggtcacaa 2280 catcagcttt atgagcagtc aggtaagaca acgcatcttt ggagatgtca ttgattgcct 2340 tctgcaaatc agctagagtg gctggcttgt tggtgcccat tgtagcaaga ggtactggag 2400 gaatggttgc ggcttagatg aaatttggaa tgtaaaagca aaatcgaaaa ttttattacc 2460 ctgactttgt gt 2472 //