ID FJ602679; SV 1; linear; genomic RNA; STD; VRL; 2490 BP. XX AC FJ602679; XX DT 02-JUL-2010 (Rel. 105, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate GC-JB segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2490 RA Jonson G.-M., Choi H.-S., Kim J.-S., Choi I.-R., K-H K.; RT "Complete genome sequence of the RNAs 3 and 4 segments of Rice stripe virus RT isolates in Korea and their phylogenetic relationships with Japan and China RT isolates"; RL Plant Pathol. J. 25(2):142-150(2009). XX RN [2] RP 1-2490 RA Kim K.-H., Gilda Jonson M., Choi H.-S., Kim J.-S., Choi I.-R.; RT ; RL Submitted (01-JAN-2009) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, RL Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea XX DR MD5; 3da46c7f1541b54f3c7318d8e27916fd. XX FH Key Location/Qualifiers FH FT source 1..2490 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="GC-JB" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="putative replication protein" FT /note="NS3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:O10387" FT /protein_id="ACR57012.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1430..2398) FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="ACR57013.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2490 BP; 770 A; 522 C; 433 G; 765 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaaaaaagaa 720 aaaagaaaaa agaaaataaa acgaataatc aaaaaaacaa aaaaatctta aaaatgaaaa 780 acacaaaaaa accaaaaaac taaaaaaact aaaaaaacta aaaaacatca tgacctagga 840 aactgcacac cactggttgt ctagtgggct ctagttggta gagaaagcta tgcttttgcc 900 taaagccatg attggccaat ccttaaaatg tgctaagcac attatccgaa gatgtctcgg 960 atgttttttt acctaaccta atttttttgt atttttatat gattttttga tttttttgta 1020 ttttatatac atatttttgt ttttgatttt tttgtttttt aatatttttt cttctaatta 1080 ctacattaat atatttgatt attcatatac ttaaaatata tagtatgtat tataaaaata 1140 gagtaatata ataaagctag taaaactaca taacaagcat atatctaaat atttagatag 1200 acttatcaaa ctaaagactc tactagagag tgagtaataa taatggcaat acatcacaca 1260 caaagcccag aaccacacag gcaaaataac ttatagaata taattaaaaa ctaaaatata 1320 cacatataaa tatacatatt aacttacacc taaagaaaca acacactgtt tgaagacatg 1380 catcttccag ggagatatga gatcccccac aactactgac ttgttcagtc tagtcatctg 1440 caccttctgc ctcgtcctcg aagaactcct tcaccaaccc gctgacttca gatgctgtct 1500 ttgaagtgtt ttcagcaagg atcttcatca gcttgctctg ttgagccaag tacagccttg 1560 tctgatttcc ataagtgctg atcgtattga cagacatacc agccagcgca tcgaagattg 1620 tggtcttcac tttcccattg gtgatgaatt catctaagac cttctttctg ccatcttcct 1680 tcttcttgtc agccaggttc tttgacttgc atgtgatgac caggagacca gttgtgtact 1740 tcatcatgtc tatgtctttt gtcagaccac gctccttctt cttaccctct ggcatggtct 1800 ttttggttat ttggaaggag tgaatgatgt gcacaacaaa caaaatgtga cttagggagt 1860 gagttgtgca ataaggagct gtttcactct ccagtttgat atattgtgga acatagtccc 1920 acagtaagtt gtcacatcct gttagtccta ggtcagagga gtctacagcc atcttaacac 1980 cagaaatttg tctcacaact tcatgtgaga catttgggaa tagctgagcc agccttccaa 2040 gtgtgatagc attggcattt gtccccaccg aggacactat cccatacctc gacaccaagg 2100 tcgaagcctc tgtgcttcca gccgccactt tcactttctt agtgacatct ctcacaaagc 2160 cagtgcctct cacatatctc atggtgatgc acatagtcat atccttggcc agtgtgtcac 2220 cacctttgtc cttcaatatg ccaatcagag ttgcagcatc atagcctgca tactctatct 2280 gaccagcaaa ggtcacaaca tcagctttat gagcagtcag gtaagacaac gcatctttag 2340 agatgtcatt gattgccttc tgcaaatcag ctagagtggc tggcttgttg gtgcccattg 2400 tagcaagagg tactggagga atggttgcgg cttagatgaa atttggaatg taaaagcaaa 2460 atcgaaaatt ttattaccct gactttgtgt 2490 //