ID   FJ561293; SV 1; linear; genomic RNA; STD; VRL; 2078 BP.
XX
AC   FJ561293;
XX
DT   23-JAN-2009 (Rel. 99, Created)
DT   23-JAN-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Malva vein clearing virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Malva vein clearing virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2078
RA   Tzanetakis I.E., Brown J.K., Martin R.R.;
RT   "First report of Malva vein clearing virus in tomato";
RL   Unpublished.
XX
RN   [2]
RP   1-2078
RA   Tzanetakis I.E.;
RT   ;
RL   Submitted (17-DEC-2008) to the INSDC.
RL   Plant Pathology, University of Arkansas, 496 N. Campus Dr. PTSC 217,
RL   Fayetteville, AR 72701, USA
XX
DR   MD5; 4ab83c3d3996f268953ec57dfffe1c61.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2078
FT                   /organism="Malva vein clearing virus"
FT                   /host="tomato"
FT                   /mol_type="genomic RNA"
FT                   /country="Mexico"
FT                   /isolation_source="plant homogenate"
FT                   /identified_by="Ioannis Tzanetakis"
FT                   /db_xref="taxon:565624"
FT   CDS             <1..1788
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B8YPT0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B8YPT0"
FT                   /protein_id="ACL82339.1"
FT                   /translation="DANLSGVEHSFNGLPDGWVYCDADGSQFDSSLSPYLINAVLTLRL
FT                   SFMEDWVIGREMLKNLYTEIVYTPIATPDGTVVKKFKGNNSGQPSTVVDNTLMVILAMK
FT                   YALLSEGIEEDEHDNMCRYFVNGDDLLIAIEPKYEHILNTFADHFKNLGLKYDFSARTR
FT                   NKSDLWFMSHMGMNRDGVFIPKLEKERIVSILEWNRSKEPVHRLEAICASMIEAWGYDD
FT                   LVHEIRKFYSWVLEQAPYNALAAEGKAPYIAETALRKLYMDVDPTESELEKYVQALNDI
FT                   EIDESLSVYHQADEKLNAGVTTPSGGGRRSGKESMPPDQQAQEDSRAKETPPNTERLNI
FT                   GGEQPRSQGPGTIVSRPDKDINVGTAGVVSAPRLTGMVAKMRVPKIKGKHAMHMGHLMT
FT                   YNPVQTDLSNARATQRQFEQWFEGVRNEYGVTEEQMTVIANGLMVWCIENGTSPNINGV
FT                   WTMMDGEEQVEYPLRPVMDHAAPTFRQIMAHFSDVAEAYIEKRNYHGNYMPRWGRQRNI
FT                   RDRSLARYCFDFYEVTTSTPIRAVEAHNQMKAAALRGETNRLFGLDGKVTTQEENTERH
FT                   TAEDVNQNLHTLLGMRGVQ"
FT   3'UTR           1789..2078
XX
SQ   Sequence 2078 BP; 653 A; 372 C; 504 G; 549 T; 0 other;
     gatgcaaatt tatcaggggt ggaacactct tttaatgggt tgcctgatgg ttgggtctat        60
     tgtgatgctg atggatctca atttgatagt tccttatcac catatttgat aaatgcagtt       120
     ttgacattgc gcttatcatt catggaagat tgggttattg gtcgagagat gttgaaaaat       180
     ttgtacactg agatagtgta tacgccaata gcaacaccag atggaacagt cgtaaagaaa       240
     ttcaaaggca ataatagtgg ccaaccatcg acggttgttg ataatacttt aatggtgata       300
     ttggccatga agtatgcttt attgtctgaa ggaattgagg aggatgagca tgataatatg       360
     tgtaggtatt ttgtgaatgg agacgatttg ctaatagcaa ttgagcctaa atatgaacat       420
     atacttaaca cattcgcaga ccacttcaag aatttaggat tgaagtatga tttttcagcg       480
     cgtacaagga acaaaagtga cttgtggttt atgtcgcaca tgggaatgaa tagagatggt       540
     gttttcatac caaagcttga aaaggaaaga atcgtatcaa tccttgaatg gaatcgttca       600
     aaggaacccg ttcatagact cgaagcgatt tgcgcatcaa tgatcgaggc ttggggttat       660
     gatgaccttg tccatgaaat acggaaattc tactcatggg tcttagaaca agcaccatac       720
     aatgcattag cggcagaagg caaggcacca tacatagctg agacagccct acgaaaatta       780
     tacatggatg tggaccctac tgaatcggag cttgagaaat atgtccaagc tttaaatgac       840
     attgaaatcg acgagagcct ctccgtttac caccaagctg acgagaaact aaatgctggt       900
     gtcacaacac catcaggagg tggcaggagg tctggaaaag agagtatgcc accagatcaa       960
     caagctcaag aagattctag agcgaaagaa acacctccaa acactgaaag attaaacatt      1020
     ggaggagagc aaccaagatc acaagggcca ggaacaatag tcagcagacc agataaggac      1080
     ataaacgttg gcacagcagg agtcgtgtcc gcaccacgac tgactgggat ggttgcaaaa      1140
     atgagggtcc ccaagattaa aggaaaacat gctatgcata tggggcatct tatgacttac      1200
     aatcctgttc aaacagactt gtctaatgca cgtgcaacac aaagacaatt tgagcagtgg      1260
     tttgagggag tgcggaatga atatggtgtc actgaagaac aaatgaccgt catagccaat      1320
     gggttgatgg tttggtgtat tgaaaatgga acttcaccaa atatcaatgg ggtttggact      1380
     atgatggatg gtgaggaaca agttgaatat ccactgcgac cagtaatgga tcacgcagca      1440
     ccaacatttc gacagataat ggcacatttt agtgacgttg ctgaagcgta tattgagaag      1500
     aggaattacc acggtaatta catgccacgc tggggtaggc aacggaacat cagagaccgt      1560
     agtttagcac gctattgttt tgacttttat gaagtcacaa ctagtacgcc aattcgagca      1620
     gtcgaagctc acaatcaaat gaaggcagct gcgctacgcg gtgaaacgaa tagattgttt      1680
     ggattggatg gaaaggtcac aacacaggag gagaacacgg agaggcacac agcggaggac      1740
     gttaatcaaa atttgcatac acttcttggc atgagaggtg ttcagtgatt gtctcggttt      1800
     tagagtaact tatatagata gtacttatag gtatttaggt aacgagtaag tacgtttatg      1860
     ttttaaatga cttgccctat atgaatcata gcgagagtgt ctctcctggt catatctggt      1920
     gtgccattag ttgcgtttac tttgcccgta tgaggctccc ctgttgcatt aaagtttagt      1980
     tcgtgctaat aaactttttt gcccgaatct acttgtgatg ttctttgaca ttaagtgagt      2040
     ctcaactcgg tcaacttgca tcccagctag cctaggac                              2078
//