ID   FJ560596; SV 1; linear; genomic RNA; STD; VRL; 1557 BP.
XX
AC   FJ560596;
XX
DT   02-FEB-2009 (Rel. 99, Created)
DT   02-FEB-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Potato virus Y isolate SD5 Nib protein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1557
RA   Zhu C., Zhang L., Pei C., Wen F.;
RT   "Cloning of the Nib gene of PVY-SD5";
RL   Unpublished.
XX
RN   [2]
RP   1-1557
RA   Zhu C., Zhang L., Pei C., Wen F.;
RT   ;
RL   Submitted (17-DEC-2008) to the INSDC.
RL   State Key Laboratory of Crop Biology, Shandong Agricultural University,
RL   Daizong Street No. 61, Taian, Shandong 27018, China
XX
DR   MD5; 986d74b4b6f97c52b2efe8e8d2b3c669.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1557
FT                   /organism="Potato virus Y"
FT                   /strain="NTN"
FT                   /isolate="SD5"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1557
FT                   /codon_start=1
FT                   /product="Nib protein"
FT                   /db_xref="GOA:B9VJK8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B9VJK8"
FT                   /protein_id="ACM17913.1"
FT                   /translation="AKHSAWMHEALTGNLQAVATMKSQLVTKHVVKGECRHFKEFLTVD
FT                   AEAEAFFRPLMDAYGKSLLNRDAYIKDIMKYSKPIDVGIVDCDAFEEAINRVIIYLQVH
FT                   GFKKCAYVTDEQEIFKALNMKAAVGAMYGGKKKDYFEHFTNADKEEIVMQSCLRLYKGL
FT                   LGIWNGSLKAELRCKEKILANKTRTFTAAPLDTLLGGKVCVDDFNNQFYSKNIECCWTV
FT                   GMTKFYGGWDKLLRRLPENWVYCDADGSQFDSSLTPYLINAVLIIRSTYMEDWDVGLQM
FT                   LRNLYTEIIYTPISTPDGTIVKKFRGNNSGQPSTVVDNSLMVVLAMHYALIKECIEFEE
FT                   IDSTCVFFVNGDDLLIAVNPDKEGILDRLSKHFSDLGLNYDFSSRTRNKEELWFMSHRG
FT                   LLIEGMYVPKLEEEGIVSILQWDRADLAEHRLEAICAAMIESWGYSELTHQIRRFYSWL
FT                   LQQQPFATIAQEGKAPYIASMALRKLYMDRAVDEEELRAFTEMMVALDDEFEFDSYEVH
FT                   HQ"
XX
SQ   Sequence 1557 BP; 471 A; 275 C; 387 G; 424 T; 0 other;
     gctaagcatt ctgcatggat gcatgaggcc ttgacaggaa atttgcaagc tgtcgcaaca        60
     atgaaaagtc aactagtaac caagcatgta gttaaaggag agtgtcgaca cttcaaagaa       120
     ttcctgactg tggatgcaga agcagaggca ttcttcaggc ctttgatgga tgcgtatggg       180
     aaaagcttgc taaatagaga tgcgtacatc aaggacatta tgaagtactc aaagcctata       240
     gatgttggta tcgtagactg tgatgcattt gaagaagcca ttaatagggt tatcatctac       300
     ctgcaagtac acggcttcaa gaagtgtgca tatgtcactg acgagcaaga aattttcaaa       360
     gcgctcaaca tgaaagctgc agtcggagcc atgtatggtg gcaaaaagaa agactatttt       420
     gagcatttca ctaatgcaga taaggaagaa atagtcatgc aaagctgttt gcgattgtat       480
     aaaggcttgc tcggcatttg gaacggatca ttgaaggcag agctccggtg taaggagaag       540
     atacttgcaa ataagacgag gacattcact gctgcacctc tagatacctt gctgggtggt       600
     aaagtgtgtg ttgatgactt caataatcaa ttttactcaa agaatattga atgctgttgg       660
     acagttggga tgactaagtt ttatggtggt tgggataaac tgcttcggcg tttacctgag       720
     aattgggtat actgtgatgc tgatggctca caatttgata gttcactaac tccatactta       780
     atcaatgctg ttctcatcat cagaagcaca tacatggaag actgggatgt ggggttgcaa       840
     atgctgcgca atttgtacac tgagattatt tacacaccaa tttcaactcc agatggaaca       900
     attgttaaga agttcagagg gaataacagt ggtcagcctt ctactgttgt ggacaactct       960
     cttatggtcg tcctcgccat gcactatgct ctcatcaaag aatgcattga gtttgaagag      1020
     attgacagca cgtgtgtgtt ctttgtcaat ggtgatgatc tgctgattgc tgtgaatccg      1080
     gataaagagg gtattcttga cagattgtca aaacacttct cagatcttgg tttaaattat      1140
     gatttctcgt caagaacaag aaataaggaa gagttgtggt ttatgtctca tagaggccta      1200
     ctgatcgagg gcatgtacgt gccgaaactt gaagaagaag ggatcgtgtc cattctccaa      1260
     tgggacagag cagacttggc tgaacacagg cttgaggcga tctgcgcagc tatgatagag      1320
     tcctggggtt attctgaact aacgcaccaa atcaggagat tctactcatg gttattgcaa      1380
     cagcaacctt ttgcaacaat agcgcaggaa gggaaggctc cttatatagc aagcatggca      1440
     ttaaggaaac tgtatatgga tagggctgtg gatgaggaag agctaagagc cttcactgaa      1500
     atgatggtcg cattagatga tgaattcgag ttcgactctt atgaagtaca ccatcaa         1557
//