ID   FJ550604; SV 1; linear; genomic RNA; STD; VRL; 1971 BP.
XX
AC   FJ550604;
XX
DT   23-JAN-2009 (Rel. 99, Created)
DT   08-MAR-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Carrot cryptic virus segment RNA 1 RNA-dependent RNA polymerase gene,
DE   complete cds.
XX
KW   .
XX
OS   Carrot cryptic virus
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1971
RX   DOI; 10.1007/s00705-009-0314-z.
RX   PUBMED; 19165417.
RA   Willenborg J., Menzel W., Vetten H.J., Maiss E.;
RT   "Molecular characterization of two alphacryptovirus dsRNAs isolated from
RT   Daucus carota";
RL   Arch. Virol. 154(3):541-543(2009).
XX
RN   [2]
RP   1-1971
RA   Willenborg J., Menzel W., Vetten H.-J., Maiss E.;
RT   ;
RL   Submitted (15-DEC-2008) to the INSDC.
RL   Institute of Plant Diseases and Plant Protection, Leibniz Universitaet
RL   Hannover, Herrenhaeuser Str. 2, Hannover 30419, Germany
XX
DR   MD5; 95946e833406ac170edd8c62e131206b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1971
FT                   /organism="Carrot cryptic virus"
FT                   /segment="RNA 1"
FT                   /host="Daucus carota"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:589918"
FT   CDS             95..1945
FT                   /codon_start=1
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:B8YNW9"
FT                   /db_xref="UniProtKB/TrEMBL:B8YNW9"
FT                   /protein_id="ACL93278.1"
FT                   /translation="MDYLTTAFNRITHWFTTPTDFEYIGNFSLPPGLLRVNDTAISNHK
FT                   KTLEHSFSKYLCADEIHLITKEYRRSDIDLDSILDDFFSGDVEKFEIPFDEHVETGLRC
FT                   MADAFRPPRLCRPAHILDVKHHYPYKWNVNAEPPFSTDEYFLTQRKTFGEFIRMHEYEH
FT                   IDKADFFRRHPNHESHDLLQTIVPPKFGYLKSTIFSWTRRWHHVIKDGFKDSSGLQTNG
FT                   YLYNRFIFPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTT
FT                   PMLWGYETFTGGWFRLNHQLYCGMIKHSFLTLDWSRFDKRAYFPLLRRILYPVRSFLTF
FT                   DEGYVPTHAAPYHPQWNHEKALRLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGL
FT                   FITQLLDSWYNYTMLATILSALGFDPKQCIIKVQGDDSIIRLTVLIPQETHERFMAHLT
FT                   HLATYYFNAIVNVKKSEVANTLNGREVLSYRNHNGFPHRDEINMLAQFYHTKARDTTPE
FT                   ITMAQAIGFAYASCGNHNRVLWVLNDIYNYYKDQGYSPNRAGLTLTFGDSPDLFVPEIP
FT                   LDHFPTKKEIRRYLTASSYINEAQNARTWPRDLFINRPAE"
XX
SQ   Sequence 1971 BP; 563 A; 547 C; 335 G; 526 T; 0 other;
     gatcaaaaga tcaacagcta cttccaaacg ctttttgcaa tcaaaataga acgcgaatct        60
     cagctgctct aactcaactt gttacttact ctaaatggat tacctcacaa ccgcattcaa       120
     ccgaatcaca cactggttca caacacctac cgatttcgaa tatattggga acttctccct       180
     acctccaggc ttgctccgtg tcaatgacac tgcaatttct aatcataaga aaactctgga       240
     acattctttc agcaaatacc tctgtgctga tgagattcat ctcatcacta aagaataccg       300
     tcgatctgat atcgatcttg attcaattct tgacgacttc ttctctggcg atgttgaaaa       360
     atttgaaatt ccattcgacg aacacgtcga aacaggttta cgctgcatgg ctgacgcctt       420
     ccgtccgcca agactctgcc gcccagctca catccttgat gtgaagcatc actaccctta       480
     caagtggaac gtcaatgcag aaccaccctt ctcaactgac gaatacttcc tcacacaacg       540
     taagaccttc ggtgagttta tacgcatgca tgaatacgaa cacattgata aagccgactt       600
     ctttcgtcgc caccctaacc atgaatccca tgacctcctt caaactatcg tacctccaaa       660
     atttggctat ctaaagtcaa ctattttctc ttggacccgt cgatggcacc acgtcattaa       720
     agatggattt aaggatagct ccggtctaca aacgaatgga tacctataca atcggtttat       780
     ctttcccatg ctcctacaca ccaaaactgc aattgtcaaa cacaatgatc ccaacaagat       840
     gcgaaccata tggggcgctt ctaaaccttg gattattgct gagactatgc tctactggga       900
     atatatagct tggatcaaac tcaaccctgg caccacacct atgctttggg gttacgaaac       960
     cttcaccggt ggatggttca gactgaacca ccaactatac tgcggaatga tcaaacattc      1020
     cttcctcacc ctggattggt cacgcttcga caaacgagcg tactttccac tcctacgtag      1080
     aatactctat cctgtacgat ccttcctcac atttgacgaa ggttatgtac cgacacatgc      1140
     agcaccgtac cacccacaat ggaatcacga aaaagctttg cgacttgaac gtctctggct      1200
     ctggacactt gaaaacttat tcgaggcacc catcatacta cctgatggac gcatgtaccg      1260
     acgccacttt gccggaatac catccggatt gttcataact caactgctag attcctggta      1320
     caattacact atgctcgcta ccattctaag cgctctaggc ttcgacccta aacaatgcat      1380
     cattaaagta caaggcgatg actcaataat ccgtctgact gttctaattc cacaagaaac      1440
     ccacgaacgt ttcatggctc atctgactca ccttgccacg tactacttca atgctattgt      1500
     caatgtcaag aagtccgaag tagccaatac acttaatggt cgtgaagtac tctcttatcg      1560
     caatcacaac ggtttccctc accgtgatga gatcaacatg cttgctcaat tctatcacac      1620
     taaagcaaga gataccacac ctgagataac catggctcaa gcaataggtt tcgcctatgc      1680
     tagctgtggc aaccacaacc gcgtattatg ggtacttaat gacatataca actactacaa      1740
     ggaccaagga tattcaccta atcgtgctgg cctgactctc acctttggag actcacctga      1800
     cctttttgtt cctgaaatcc cccttgacca ttttcctaca aagaaggaga tccgtcgtta      1860
     cctgacggct tcttcctaca ttaacgaagc tcaaaacgct cggacttggc ccagagacct      1920
     gtttattaac aggcctgccg agtaaagccg atcgctttgt ttgttatttt c               1971
//