ID   FJ544938; SV 1; linear; genomic RNA; STD; VRL; 1760 BP.
XX
AC   FJ544938;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate C27a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1760
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-1760
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 1fb7efd9a7b1f8b9b226c158c4bf78cf.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1760
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="C27a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..1620
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUZ7"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUZ7"
FT                   /protein_id="ACR46382.1"
FT                   /translation="GQTFSIRSRSRSVRIDRNVDLPQLEAKPRLSSTVRGLAGRGVVYI
FT                   PKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPIFKIVIRLPANAFTGLTWVMS
FT                   FDAYNRITNRTTASADPVYTPSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESP
FT                   RLHFTCLTGNNKELAADWQAVVELYAELEEATTFLGKPTLVFDPGVFNGKFQFLTCPPI
FT                   FFDLTAVTALRSAGLTSGQVPMVGTTKVYNLNSTLVSCVLGMGGTIKGRVHICAPIFYS
FT                   IVLWVVCEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSS
FT                   LNFYAIAGPIAPSGETARLPIVVQIDEIMRPDLSLPSFEDDYFVWVDFSEFTLDKEEIE
FT                   IGSRFFDFTSNTCKVSLGENPFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTITK
FT                   LVGDKATGLDGPSQVIALQRLEGVAELLVGNFAGANPNSHFSLYSRWMAIKLDQAKSIK
FT                   VLRVLCKPRPGFSFYGRTSFPV"
FT   mat_peptide     <1..105
FT                   /product="movement protein 2B"
FT   mat_peptide     106..1617
FT                   /product="coat protein 2C"
XX
SQ   Sequence 1760 BP; 445 A; 338 C; 431 G; 546 T; 0 other;
     gggcaaactt tttctatcag gagtcgatca cgatcggtga ggattgacag aaatgttgat        60
     cttcctcaac ttgaggctaa gcccagatta agctcaaccg tgaggggatt ggctggtaga       120
     ggagttgttt acattcccaa ggattgccag gcaaaccgct acttgggcac cctaaacata       180
     cgtgatatga tttcagattt taagggtgtt caatatgaaa agtggataac tgcaggattg       240
     gttatgccta ttttcaagat agtaattagg ctacctgcaa atgcctttac cggactgaca       300
     tgggtgatga gctttgatgc ttacaaccgg ataactaata gaaccactgc tagtgcagat       360
     ccagtataca ccccatcagt cccacactgg cttatccatc ataagttggg cacgttttca       420
     tgtgagatag actatggaga attgtgtggc catgccatgt ggtttaaatc cacaacattt       480
     gaatctccgc ggttgcattt cacgtgttta acgggcaaca acaaagagtt ggcggcagac       540
     tggcaagctg tcgtggaact gtatgctgaa ttggaagagg ctaccacctt ccttgggaaa       600
     ccaactttgg tttttgaccc aggagttttc aatggtaaat tccaattttt aacttgccct       660
     cctatattct ttgatttaac agccgtcacg gctcttagaa gtgctgggct gacgtcggga       720
     caagttccaa tggtcggcac tacaaaggtt tataacttaa atagcactct tgtgagttgt       780
     gttttgggta tgggaggtac tattaaagga agggtgcaca tttgtgcgcc gatcttttat       840
     agtatagttt tatgggttgt ttgcgagtgg aacgggacca ctatggattg gaatgaactt       900
     ttcaaatatc ccggggtgta tgtggaagag gatggaagct ttgaagttaa aattcgctct       960
     ccatatcacc gaacacctgc tagattgctc gctggacaga gtcagagaga catgagctct      1020
     ttgaatttct acgcaatagc agggcctatc gctccatcgg gtgaaacggc gcggctcccc      1080
     attgttgtgc aaattgatga gatcatgcgc ccagacctct ctctacctag ttttgaagat      1140
     gattatttcg tttgggtgga tttttctgaa ttcactctcg ataaagaaga aattgagatc      1200
     ggctctcgtt tctttgattt tacttcaaat acttgtaaag tgtctctggg agagaatccg      1260
     tttgctgcaa tgattgcctg ccatgggttg cacagtggtg tgttagacct caaatttcaa      1320
     tggagtctaa acaccgaatt tggcaagagc agcgggagcg tcactattac gaagttggtt      1380
     ggtgataagg ctactggtct ggatggtcct tcacaggtta ttgccttaca gagactagag      1440
     ggagtagcag aattgttggt tgggaacttt gcaggtgcaa accccaattc tcacttctct      1500
     ctctatagtc gatggatggc aattaaacta gatcaagcta agagcattaa agtgctccgt      1560
     gttttgtgta agcctcgtcc aggtttcagt ttttatggaa ggaccagctt cccagtctag      1620
     ggtatctgac tttaaaagac ccgagtgtac atatatgctt tattaattat gtgtgttatc      1680
     ttgtgttgta atttgtttta acttgtttac tgctttagcg cgtttatttt ctcgctttta      1740
     gtggcgacag tgtgttgttt                                                  1760
//