ID   FJ544937; SV 1; linear; genomic RNA; STD; VRL; 1769 BP.
XX
AC   FJ544937;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate C26b polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1769
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-1769
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 3e43634fd0e5278bbf3b80d7807884bc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1769
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="C26b"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..1620
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUZ6"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUZ6"
FT                   /protein_id="ACR46381.1"
FT                   /translation="GQTFSIRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYI
FT                   PKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFKIVVRLPANAFTGLTWVMS
FT                   FDAYNRITSRITASADPVYTLSVPHWLIHHKKGTFSCEIDYGELCGHAMWFKSTTFESP
FT                   RLHFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCSPI
FT                   FFDLTAVTALKSAGLTLGQVPMVGTTKVYNLNSTLVSCVLGMGGTIRGRVHICAPIFYS
FT                   IVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPAKLLAGQSQRDMSS
FT                   LNFYAIAGPIAPSGETAQLPIVVQIDEIMRPDLSLPSFEDDYFVWVDFSEFTLDKEEIE
FT                   IGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTITK
FT                   LVGDKATGLDGPSQVIALQRLEGVAELLIGNFAGANPNSHFSLYSRWMAIKLDQAKSIK
FT                   VLRVLCKPRPGFSFYGRTSFPV"
FT   mat_peptide     <1..105
FT                   /product="movement protein 2B"
FT   mat_peptide     106..1617
FT                   /product="coat protein 2C"
XX
SQ   Sequence 1769 BP; 439 A; 338 C; 438 G; 554 T; 0 other;
     gggcaaacct tctctatcag aagccgctca cgatctgtga ggattgacag aaatgttgat        60
     cttccccaac ttgaggccga gcccagattg agctcgaccg tgaggggatt ggctggtagg       120
     ggagtagtct atattcctaa ggattgccag gcaaatagat acttgggcac cctgaatata       180
     cgagatatga tttcagactt caagggtgtc cagtatgaaa agtggataac tgcaggatta       240
     gtcatgccaa cttttaagat tgttgttagg ctacctgcta atgcctttac tggattgacg       300
     tgggtgatga gctttgatgc ttataatcgg ataactagta gaatcactgc tagtgcggat       360
     cctgtatata ccctgtcagt cccccattgg cttatccacc acaagaaggg cacgttttca       420
     tgcgagatag actacggaga attgtgtggc cacgctatgt ggttcaagtc cacgacgttt       480
     gaatctccaa ggttacattt tacatgttta acgggcaata ataaagagtt agcggcagac       540
     tggcaagctg tcgtggaact atatgctgag ttggaagagg ccacttcttt tcttgggaaa       600
     ccaactttgg tttttgaccc gggagttttt aatggtaaat tccaatttct tacttgctct       660
     cccatattct ttgacttgac agccgtcacg gctcttaaga gtgctgggct gacgttggga       720
     caagtcccta tggtcggtac tactaaggtt tataacttaa acagcactct agtgagttgt       780
     gttctgggca tgggaggtac tatcagagga agggtacaca tttgtgcgcc aatcttctat       840
     agtatagttt tatgggttgt cagtgagtgg aacgggacca ctatggactg gaatgagctt       900
     ttcaaatatc ccggggtgta tgtggaagag gatggaagct ttgaagttaa aattcgctct       960
     ccatatcacc gaacacctgc taaattgctc gctggacaga gccagagaga catgagctcc      1020
     ctgaatttct acgcaatagc agggcctatc gctccatcgg gtgaaacagc gcagcttccc      1080
     atcgttgtgc aaattgatga gatcatgcgc ccagacctct ctctacctag ttttgaagat      1140
     gattatttcg tttgggtgga tttttctgag ttcactctcg ataaagaaga aattgagatt      1200
     ggctctcgtt tctttgattt cacttcaaat acttgtagag tatctatggg tgagaatccg      1260
     tttgctgcaa tgattgcctg ccatgggttg catagtggtg tgttagacct caaatttcaa      1320
     tggagtctga acaccgaatt tggcaagagc agcgggagtg tcactatcac gaagttggtt      1380
     ggtgataagg ctactggtct ggacggtcct tctcaggtta ttgccttaca gagactagag      1440
     ggagtagcag aactgttgat tgggaatttt gcaggtgcaa accccaattc tcacttctct      1500
     ctctatagtc gatggatggc aattaaatta gatcaagcta agagcattaa agtgctccgt      1560
     gttttgtgca agcctcgtcc aggcttcagt ttttatggaa gaaccagttt cccagtctag      1620
     ggtatctgac tttaaaagac ccaagtgtac atatgtgctt tattagttat gtgtgttatt      1680
     ttgtgttgta atttgtttta acttgtttac tgctttagtg tgtttatttt ttttttttaa      1740
     acgcttttag tggcgatagt gtgttgttt                                        1769
//