ID   FJ544934; SV 1; linear; genomic RNA; STD; VRL; 1760 BP.
XX
AC   FJ544934;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate C23a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1760
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-1760
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 619d47068adc456ef2f33585daae2bdf.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1760
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="C23a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..1620
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUZ3"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUZ3"
FT                   /protein_id="ACR46378.1"
FT                   /translation="GHTFSIRSRSRSVRIDRNVDLPQLEVEPRLSSTVRGLAGRGVIYI
FT                   PKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFKIVVRLPANAFTGLTWVMS
FT                   FDAYNRITSRITASADPVYTLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESP
FT                   RLHFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGAFSGKFQFLTCPPI
FT                   FFDLTAVTALKSAGLTLGQVPMVGTTKVYNLNSALVSCVLGMGGTIRGRVHICAPIFYS
FT                   IVLWVVSEWNGTTMGWNELFKYPGVYVENDGSFEVKIRSPYHRTPARLLAGQNQRDMSS
FT                   LNFYAIAGPIAPSGETARLPIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIE
FT                   FGSRFFDFTSSTCRVSMGENPFAAMIACHGLHSGVLDLKLQWSLNTEFGKSSGSVTITK
FT                   LVGDKAMGLDGPSQVFAIQKLEGVTDLLIGNFAGANPNSHFSLYSRWMAIKLDQARSIK
FT                   VLRVLCKPRPGFSFYGRTSLPV"
FT   mat_peptide     <1..105
FT                   /product="movement protein 2B"
FT   mat_peptide     106..1617
FT                   /product="coat protein 2C"
XX
SQ   Sequence 1760 BP; 440 A; 340 C; 434 G; 546 T; 0 other;
     ggacatacct tctctatcag aagtcgttcg cgatctgtga ggatcgatag aaacgttgac        60
     cttcctcaac ttgaggttga gcccagactg agctcaaccg tgagaggatt agctggtaga       120
     ggagtgatct atattcccaa ggattgccag gcaaataggt atttgggcac cctgaatata       180
     cgtgatatga tctcagattt taagggtgtc cagtatgaaa aatggataac tgcaggatta       240
     gtcatgccta cttttaaaat agtcgttagg cttcctgcaa atgcctttac tggattgacg       300
     tgggtaatga gttttgatgc ttataaccgg ataactagta gaatcactgc tagtgctgat       360
     cctgtatata ccctgtcggt cccacattgg cttatccatc ataagttagg cacgttttca       420
     tgtgaaatag actatggaga gttgtgtggt cacgccatgt ggttcaaatc cacaacattc       480
     gaatctccaa ggttgcattt tacatgtcta acgggcaaca acaaagagct agcggcagac       540
     tggcaagctg tcgtggaatt gtatgctgag ttggaagagg ccacctcttt tcttgggaaa       600
     ccaactttgg tttttgaccc aggtgctttt agtggcaaat ttcaatttct tacttgccct       660
     cccatattct tcgatctaac agccgtcacg gctcttaaga gtgctgggct gacattgggg       720
     caagtcccaa tggttggcac taccaaggtt tataatctta atagtgctct tgtgagctgt       780
     gttttgggta tgggaggtac tattagagga agggtgcata tttgtgcgcc aatcttctat       840
     agtattgttt tatgggttgt tagcgagtgg aacgggacca ctatgggctg gaacgaactt       900
     tttaagtatc ccggggttta tgtggagaat gatgggagtt ttgaagttaa gattcgctct       960
     ccatatcacc gaacgcctgc tagattgctt gctggtcaaa atcagaggga catgagctct      1020
     ctgaacttct atgcaatagc aggacctatc gctccatcgg gagaaaccgc acggcttcct      1080
     atcgtcgtac aaattgatga aatcgtgcgc ccagacctct ctttgccaag ttttgaagat      1140
     gattatttcg tgtgggtgga tttttctgag ttcactctcg ataaagaaga aattgagttt      1200
     ggttctcgtt tcttcgattt cacttcaagt acttgtagag tgtcaatggg agaaaacccg      1260
     tttgctgcaa tgatcgcctg tcatggattg catagcggtg tattggacct caagcttcaa      1320
     tggagtctga acaccgaatt tggcaagagc agcgggagcg ttactatcac gaagttggtg      1380
     ggcgataaag ccatgggcct ggatggacct tctcaggttt ttgccataca aaagctagaa      1440
     ggggttacgg atttgttaat tgggaatttt gcaggagcaa acccaaactc acatttctcc      1500
     ctctatagtc gatggatggc aattaaattg gaccaagcaa ggagtattaa agtactccga      1560
     gtcttgtgca agcctcgtcc aggtttcagt ttttatggaa gaaccagcct cccagtctag      1620
     ggtatctgac tttaaaagac ccatgtatat atgtacatct tattagttat gtgcgttgtt      1680
     ttgtgttgta gtttgcttta acttgtctac tgctttagtg tgcttaattt catgctttta      1740
     gtggcgatag tgtgttgttt                                                  1760
//