ID   FJ544932; SV 1; linear; genomic RNA; STD; VRL; 1760 BP.
XX
AC   FJ544932;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate C21a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1760
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-1760
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 22fb43d07e6ee066f6a8fddcf7ce0a50.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1760
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="C21a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..1620
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUZ1"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUZ1"
FT                   /protein_id="ACR46376.1"
FT                   /translation="GQTFSIRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYI
FT                   PKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFKIIVRLPANAFTGLTWVMS
FT                   FDAYNRITSRITASADPVYTLSVPHWLIHHKKGTFSCEIDYGELYGHAMWFKSMTFESP
FT                   RLHFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPI
FT                   FFDLTAVTALKSAGLTLGQVPMVGTTRVYNLNSTLVSCVLGMGGTIRGRVHICAPIFYS
FT                   IVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSS
FT                   LNFYAIAGPIAPSGETARLPIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIE
FT                   IGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTITK
FT                   LVGDKATGLDGPSQVIALQRLEGTAELLIGNFAGANPNSHFSLYSRWMAIKLDQAKSIK
FT                   VFRVLCKPRPGFSFYGRTSFPV"
FT   mat_peptide     <1..105
FT                   /product="movement protein 2B"
FT   mat_peptide     106..1617
FT                   /product="coat protein 2C"
XX
SQ   Sequence 1760 BP; 438 A; 335 C; 438 G; 549 T; 0 other;
     gggcaaacct tctctatcag aagccgctca cggtctgtga ggattgacag aaatgttgat        60
     cttccccaac ttgaggccga gcccagattg agctcgaccg tgaggggatt ggctggtagg       120
     ggagtagtct acattcccaa ggattgccag gcaaatagat acttgggcac cctgaatata       180
     cgagatatga tttcagattt taagggtgtc cagtatgaaa agtggataac tgcaggatta       240
     gtcatgccta cttttaagat tattgttagg ctacctgcta atgcctttac tggattgacg       300
     tgggtgatga gcttcgatgc ttataaccgg ataactagta gaatcactgc tagtgcggat       360
     cctgtatata ccctgtcagt ccctcattgg cttatccacc ataagaaagg cacgttttca       420
     tgtgagatag actacggtga attgtatggt cacgccatgt ggttcaagtc catgacgttt       480
     gaatctccaa ggttgcattt cacatgttta acgggcaata acaaagagtt agcggcagac       540
     tggcaagctg ttgtggaact atatgctgaa ttggaagagg ccacttcttt tcttgggaaa       600
     ccaactttgg tttttgaccc gggagttttt aatggtaaat tccaatttct tacttgccct       660
     cccatattct ttgatttgac agccgtcacg gctcttaaga gtgctgggct aacattggga       720
     caagtcccaa tggttggtac tactagggtt tacaacttaa acagcactct agtgagttgt       780
     gttttgggta tgggaggtac tattagagga agggtacata tttgtgcgcc aatcttctat       840
     agtatagttt tatgggttgt cagtgagtgg aacgggacca ctatggattg gaacgagctt       900
     ttcaaatatc ccggggtgta tgtggaagag gatggaagct ttgaagttaa aattcgctct       960
     ccatatcacc gaacacctgc tagattgctt gctggacaga gccagagaga catgagctcc      1020
     ctgaatttct acgcaatagc agggcctatc gctccatcgg gtgaaacggc gcggcttccc      1080
     atcgttgtgc aaattgatga aatcgtgcgc ccggacctct ctctacctag ttttgaagac      1140
     gattatttcg tttgggtgga cttttctgag ttcactctcg ataaagaaga aattgagatt      1200
     ggctctcgtt tctttgattt tacttcgaat acttgtagag tttctatggg agagaatcca      1260
     tttgctgcaa tgattgcctg ccatgggttg catagtggtg tgttggacct caaatttcaa      1320
     tggagtctaa acaccgaatt tggcaagagc agcgggagcg tcactatcac gaagttggtt      1380
     ggtgataagg ctactggtct ggacggtcct tctcaggtta ttgccttaca gagactagag      1440
     ggaacagcag aattgttgat agggaatttt gcaggtgcaa accccaattc tcacttctct      1500
     ctctatagtc gatggatggc aattaaatta gaccaagcta agagcattaa agtgttccgt      1560
     gttttgtgta agcctcgtcc aggtttcagt ttttacggaa gaaccagctt cccagtctag      1620
     ggtatctgac tttaaaagac ccaagtgtac atatgtgctt tattaaatat gtgtgttatt      1680
     ttgtgttgta gtttgtttta acttgtttac tgctttagtg tgtttatttt catgctttta      1740
     gtggcgacag tgtgttgttt                                                  1760
//