ID   FJ544931; SV 1; linear; genomic RNA; STD; VRL; 1761 BP.
XX
AC   FJ544931;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate C20a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1761
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-1761
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 33a96baddd04783a37673b4f9fde97e6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1761
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="C20a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..1620
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUZ0"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUZ0"
FT                   /protein_id="ACR46375.1"
FT                   /translation="GQTFSIRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGSAGRGVVYI
FT                   PKDCQASRYLGALNIRDMISDFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMS
FT                   FDAYNRITSRITASADPVYTLSVPHWLIHHKKGTFSCEIDYGELCGHAMWFKSTTFESP
FT                   RLHFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPI
FT                   FFDLTAVTALKSAGLTLGQVPMVGTTKVYNLNSTLVSCVLGMGGTIRGRVHICAPIFYS
FT                   IILWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYRRTPARLLAGQSRRDMSS
FT                   LNFYAIAGPIAPSGETARLPIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTIDKEEIE
FT                   IGSRFFDFTSNTCKVSLGENPFAAMIACHGLHSGVLDLKFQWSLNTEFGMSSGSVTITK
FT                   LVGDKATGLDGPSQVIALQRLEGVAELLVGNFAGANPNSHFSLYSRWMAIKLDQAKSIK
FT                   VLRVLCKPRPGFSFYGRTSFPV"
FT   mat_peptide     <1..105
FT                   /product="movement protein 2B"
FT   mat_peptide     106..1617
FT                   /product="coat protein 2C"
XX
SQ   Sequence 1761 BP; 439 A; 344 C; 437 G; 541 T; 0 other;
     gggcaaacct tctctatcag aagccgctca cggtctgtga ggattgacag aaatgttgat        60
     cttccccaac ttgaggccga gcccagattg agctcgaccg tgaggggatc ggctggtagg       120
     ggagtagtct acattcccaa ggattgccag gcaagtagat acttgggcgc cctaaatata       180
     cgagatatga tttcagattt taagggtgtc cagtatgaaa agtggataac tgcaggatta       240
     gtcatgccta cttttaagat tgttattagg ctacctgcta acgcctttac tggattgacg       300
     tgggtgatga gtttcgacgc ttataaccgg ataactagta gaatcactgc tagtgcggat       360
     cctgtataca ccctgtcagt tccccactgg cttatccacc acaagaaagg cacgttttca       420
     tgtgagatag actacggaga attgtgtggt cacgccatgt ggttcaagtc cacgacgttt       480
     gaatctccaa ggttgcattt cacatgctta acgggcaata ataaagagtt agcggcagac       540
     tggcaagctg tcgtggaact atatgctgaa ctggaagagg ccacttcttt tcttgggaaa       600
     ccaactttgg tttttgaccc gggagttttt aatggtaaat tccaatttct tacttgccct       660
     cccatattct ttgacttgac agccgtcacg gctcttaaga gtgctggact aacattggga       720
     caagtcccaa tggttggtac tactaaggtt tacaacttaa acagcactct agtgagttgt       780
     gttctgggta tgggaggtac tattagagga agggtacaca tttgtgcgcc aatcttctat       840
     agtataattt tatgggttgt cagtgagtgg aacgggacca ctatggattg gaatgagctt       900
     ttcaaatatc ccggggtgta tgtggaagag gatggaagct ttgaagttaa aattcgctct       960
     ccatatcgcc gaacacctgc cagattgctt gctggacaga gtcggagaga catgagctcc      1020
     ctgaatttct acgcaatagc agggcctatc gctccatcgg gtgaaacggc gcggcttccc      1080
     atcgttgtgc aaattgatga aatcgtgcgc ccagacctct ctctacctag ttttgaagat      1140
     gattatttcg tttgggtgga cttttctgaa ttcactatcg ataaagaaga aattgagatt      1200
     ggctctcgtt tctttgattt cacttcaaat acttgtaaag tatctctggg agagaatccg      1260
     tttgctgcaa tgattgcctg ccatgggttg catagtggtg tgttagacct caaatttcaa      1320
     tggagtctaa acaccgaatt tggcatgagc agcgggagcg ttactatcac aaagttggtt      1380
     ggtgataagg ctactggtct ggacggtcct tctcaggtta ttgccttaca gagactagag      1440
     ggagtagcag aattgttggt tgggaatttt gcaggtgcaa accccaattc tcacttctct      1500
     ctctatagtc gatggatggc aattaaatta gatcaagcca agagcattaa agtgcttcgt      1560
     gtcttgtgta agcctcgtcc aggcttcagt ttttatggaa gaaccagctt cccagtctag      1620
     ggtatctgac tttaaaagac ccaagtgtac atatgtgctt tgtttaatta tgtgtgttat      1680
     tttgtgttgt aagttgtttt aacttgttta ctgctttagt gtgtttattt tcatgctttt      1740
     agtggcgaca gtgtgttgtt t                                                1761
//