ID   FJ544930; SV 1; linear; genomic RNA; STD; VRL; 2097 BP.
XX
AC   FJ544930;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate AB30a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-2097
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-2097
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; b0e2d89902c3be04282b1ebf1b2f64f1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2097
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="AB30a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..>2097
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUY9"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR021081"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUY9"
FT                   /protein_id="ACR46374.1"
FT                   /translation="PHLGGSVEQWLAAIETDPSFRQTVKEDVQENRERPDAIRMFSWKV
FT                   GFGPIDNPNNCDWHFVLTGERPARPTRPVKADEVVVAPQPKKVVIPSPPPPPTPYFRAV
FT                   GAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQGAPLKLSLAMKFAMLKHTT
FT                   WRKWYDTSDERLMEAHPGGPCFPPPPPIQKPPSFQERVRESCRIKSCARAFALETSLGL
FT                   NRAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALR
FT                   RREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTR
FT                   ANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGN
FT                   PTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVA
FT                   STNATVDTDSVLAATSVGTLRQHVGSMHYRTVASTVHQAQVHGTTLRATMMGNTVVVSP
FT                   EGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQL
FT                   EAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMP
FT                   IFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTFSCE
FT                   IDYGE"
FT   mat_peptide     <1..717
FT                   /product="putative homing protein 2A"
FT   mat_peptide     718..1761
FT                   /product="movement protein 2B"
FT   mat_peptide     1762..>2097
FT                   /product="coat protein 2C"
XX
SQ   Sequence 2097 BP; 514 A; 505 C; 569 G; 509 T; 0 other;
     ccccatctag ggggttccgt ggaacaatgg ctggcggcca ttgaaactga tccctccttc        60
     cgccaaactg tcaaggagga tgtccaggaa aaccgggagc gtccagacgc tatccggatg       120
     ttttcctgga aagtgggatt cgggcccatt gacaacccga ataactgcga ctggcatttc       180
     gtccttacgg gcgaaaggcc agcgcggccg acccggccgg ttaaagccga tgaggttgtg       240
     gtggcgccac aaccgaagaa ggtggttatt ccatcaccac ctcctccccc gactccctac       300
     tttagggctg tcggggcttt tgcgccaacc aggtccgggt ttattcgggc cactgtggaa       360
     agactcaccc gggaacggga agagtcgaga gctgcggcac tctttgccga actgccattg       420
     gagtaccctc agggtgctcc tttgaagttg agtctggcga tgaaattcgc catgctcaaa       480
     cataccactt ggaggaagtg gtatgacacc agtgatgagc gcctcatgga ggcccatcct       540
     ggtggacctt gttttcctcc tcctccccca atccaaaaac ctccctcttt ccaggagagg       600
     gttagggagt cttgcaggat aaaatcctgc gccagggctt ttgccttgga gacctccctg       660
     ggtcttaata gggcctgggt aggtttggtg gacatcccca gcacttctgt gtgctgtgct       720
     gatggaagaa ctaccggtgg gcaaacgatt gcccaagaag ctgatccctt gcaacatagg       780
     gtcagcacat ctgtagcccc cggtagggca caatggatct ctgagcgcag acaggctctg       840
     cgaagaagag agcaagcaaa tagcttgcag ggtcttgctg ctcaaacgga tatgacattt       900
     gagcaggcca ggaatgcata tcttggtgct gccgatatga tcgagcaagg cctaccactg       960
     ctcccccctt tacgcagtgc atatgccccc aggggcttgt ggaggggacc ctctaccaga      1020
     gccaattaca ctttggattt taggctcaat ggtataccga ccgggacgaa cacattagaa      1080
     attttgtaca atcccgtgtc tgaagaagag atggaagagt accgggatag aggtatgtca      1140
     gccgtggtga ttgatgcgct ggaaatagcg ataaacccat ttggcatgcc tggaaaccca      1200
     acggacttaa ccgtcgtagc aacatatggg catgagcgtg atatgacacg tgcctttatt      1260
     ggatctgctt ccacattctt agggaatggg ttagctagag ccattttctt tcctggtttg      1320
     caatatagcc aggaggaacc aaggcgcgaa tctattattc gcctatatgt tgcctctact      1380
     aatgccactg tagacactga ttcagtcctg gcagccacta gtgttggcac tctgcgtcag      1440
     cacgttggct ccatgcacta tcggacagtg gctagtactg tgcatcaggc ccaggtgcat      1500
     ggtacaacac tcagggctac tatgatgggt aatactgttg tagtatcacc tgagggaagc      1560
     ttagttactg gaacccctga ggcaagagtt gaaatagggg gtggttccag tattagaatg      1620
     gtggggcctc tacaatggga aagtgtggag gaaccagggc aaactttttc tatcaggagt      1680
     cgatcacgat cggtgaggat tgacagaaat gttgatcttc ctcaacttga ggctgagccc      1740
     agattaagct caaccgtgag gggattggct ggtagaggag ttgtttacat tcccaaggat      1800
     tgccaggcaa accgctactt gggcacccta aacatacgtg atatgatttc agattttaag      1860
     ggtgttcaat atgaaaagtg gataactgca ggattggtta tgcctatttt caagatagta      1920
     attaggctac ctgcaaatgc ctttaccgga ctgacatggg tgatgagctt tgatgcttac      1980
     aaccggataa ctagtagaat cactgctagt gcagatccag tatacaccct atcagtccca      2040
     cactggctta tccatcataa gttgggcacg ttttcatgtg agatagacta tggagaa         2097
//