ID   FJ544929; SV 1; linear; genomic RNA; STD; VRL; 2097 BP.
XX
AC   FJ544929;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate AB29b polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-2097
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-2097
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; fd003cd564ae6301035a276189063f46.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2097
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="AB29b"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..>2097
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUY8"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR021081"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUY8"
FT                   /protein_id="ACR46373.1"
FT                   /translation="PHLGGSVEQWLAAIETDPSFRQTVKEDVQLNRERPDAIRMFSWKV
FT                   GFGPIDNPNNCNWHFVLTGERLAQPTRPAKADEVAVVPQPKKVVIPSPPPPPAPYFRVV
FT                   GAFAPTRSGYIRATVERLTREREESRAVALFAELPLEYPQGVPLKLSLAMKFAMLKHTT
FT                   WRKWYDTSDERLTEAHPGGPCLPPSPPIQKPPSFQERVRESCRIKSCARAFALETSLGL
FT                   NRAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALR
FT                   RREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTR
FT                   ANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDAPEIAINPFGMPGN
FT                   PTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVA
FT                   STNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTTLRATMMGNTVVVSP
FT                   EGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQL
FT                   EAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMP
FT                   TFKIVVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKKGTFSCE
FT                   IDYGE"
FT   mat_peptide     <1..717
FT                   /product="putative homing protein 2A"
FT   mat_peptide     718..1761
FT                   /product="movement protein 2B"
FT   mat_peptide     1762..>2097
FT                   /product="coat protein 2C"
XX
SQ   Sequence 2097 BP; 512 A; 499 C; 578 G; 508 T; 0 other;
     cctcatttag ggggttctgt tgaacaatgg ctggcggcca ttgaaactga tccctccttc        60
     cgccaaactg tcaaggagga tgtccagtta aaccgggagc gtccagacgc tatccggatg       120
     ttttcctgga aagtgggatt cgggcccatt gataacccga acaattgcaa ctggcatttc       180
     gtccttacgg gcgaaaggct agcgcagccg acccggccgg ctaaagccga tgaggttgcg       240
     gtggtgccgc aaccgaagaa ggtggtgatt ccatcaccac ctcctccccc ggctccctac       300
     tttagggttg ttggggcttt tgcaccaacc aggtccgggt acatacgggc cactgtggaa       360
     agactcaccc gggaacggga agagtcgaga gctgtggcac tctttgccga actgccattg       420
     gagtaccctc agggtgttcc tttgaagttg agcctggcga tgaaattcgc catgctcaaa       480
     cataccactt ggaggaagtg gtatgacacc agtgatgagc gcctcacgga ggctcatccc       540
     ggtggacctt gtcttcctcc ttctccccca atccaaaaac ctccctcttt ccaggagagg       600
     gttagggagt cttgcaggat aaaatcctgc gctagggctt ttgccctgga gacctccctg       660
     ggtcttaata gggcctgggt aggtttggtg gacatcccca gcacttctgt gtgctgtgcg       720
     gatggaagaa ctactggtgg gcaaacgatt gctcaagaag ctgatccctt acagcatagg       780
     gtcagtactt ctgtagcccc cggtagggca caatggatct ccgagcgcag acaggctctg       840
     cgaaggagag agcaagcaaa tagcttgcaa ggtcttgctg ctcagactga catgactttt       900
     gagcaagcca ggaatgctta tcttggtgcc gccgatatga ttgagcaagg cctaccgttg       960
     cttccccctt tgcgcagcgc ttatgccccc aggggcttgt ggaggggacc ttctaccaga      1020
     gccaattaca cgttagactt taggcttaat ggtataccga cagggacaaa tacactggag      1080
     atattatata atcccgtgtc ggaggaagag atggaagagt accgggatag aggtatgtcg      1140
     gcagtggtga ttgatgcgcc agagatagcc ataaatccat ttggcatgcc aggaaatcca      1200
     acggacttaa ccgtcgtggc gacatatggg catgagcgtg atatgacacg cgcctttatt      1260
     ggatcagctt ccacattcct agggaatggg ttagctaggg ccatattctt cccgggctta      1320
     caatatagtc aggaggaacc aaggcgtgag tctataattc gcctatatgt tgcttcaacc      1380
     aatgccacag tagacactga ttcagtcttg gcagccatca gtgttggcac tttgcgtcaa      1440
     cacgttggtt ccatgcacta tcgaactgtg gccagtactg tgcaccaggc ccaggtgcaa      1500
     ggtacaactc ttagggcaac tatgatgggt aatactgttg tagtatcgcc tgaaggaagc      1560
     ctagttactg gaacccctga agcaagagtc gaaatagggg gtggttctag tattaggatg      1620
     gtgggacctc tacaatggga aagtgtggag gaaccagggc aaaccttctc tatcagaagc      1680
     cgctcacgat ctgtgaggat tgacagaaat gttgatcttc cccaacttga ggccgagccc      1740
     agattgagct cgaccgtgag gggattggct ggtaggggag tagtctatat tcctaaggat      1800
     tgccaggcaa atagatactt gggcaccctg aatatacgag atatgatttc agacttcaag      1860
     ggtgtccagt atgaaaagtg gataactgca ggattagtca tgccaacttt taagattgtt      1920
     gttaggctac ctgctaatgc ctttactgga ttgacgtggg tgatgagctt tgatgcttat      1980
     aatcggataa ctagtagaat cactgctagt gcggatcctg tatataccct gtcagtcccc      2040
     cattggctta tccaccacaa gaagggcacg ttttcatgcg agatagacta cggagaa         2097
//