ID   FJ544925; SV 1; linear; genomic RNA; STD; VRL; 2088 BP.
XX
AC   FJ544925;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate AB26a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-2088
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-2088
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 9e12369ed00d0c576d15ab5581330929.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2088
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="AB26a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..>2088
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUY4"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR021081"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUY4"
FT                   /protein_id="ACR46369.1"
FT                   /translation="PHLGGSVEQWLAAISTDPSFRQTVKEDVQENRERPDAIRMFSWKV
FT                   GFGPIDNPEKCNWHFVLTGERPVQPTGPVKAHEVVVPPVKVIPSPPPMPLPYFRPMGAF
FT                   APTRSGYIRATVERLTREREESRAAALSAELPLEYPQGAPLKLSLAMKFAMLKHTTWRK
FT                   WYDVSDGRLLEAHPGGPCLPPPPPIQSPPSFSERVRGSCRKKSCAKAFALETSLGLNRA
FT                   WIGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRISTSVAPGRAQWISERRQALRRRE
FT                   QANSLQGLAAQTDMSFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT                   TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT                   ATVDTDSVLAAISVGTLRQHVGFMHYRTVASTVHQAQVQGTTLRATMMGNTVVVSPEGS
FT                   LVTGTPEARVEIGGGSSIRMVGPLRWESVEEPGHTFSIRSRSRSVRIDRNVDLPQLEVE
FT                   PRLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFK
FT                   IVVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTFSCEIDY
FT                   GE"
FT   mat_peptide     <1..708
FT                   /product="putative homing protein 2A"
FT   mat_peptide     709..1752
FT                   /product="movement protein 2B"
FT   mat_peptide     1753..>2088
FT                   /product="coat protein 2C"
XX
SQ   Sequence 2088 BP; 507 A; 493 C; 565 G; 523 T; 0 other;
     ccccatcttg ggggttccgt agaacaatgg ctggcggcca ttagcactga tccctccttc        60
     cgccaaactg ttaaggagga tgtccaggaa aacagggagc ggcctgatgc catccgcatg       120
     ttttcctgga aagtgggatt cgggcccatt gacaaccccg aaaaatgcaa ctggcatttc       180
     gtcctcacgg gcgagagacc agtgcagccg accgggccgg ttaaagccca tgaggtggtg       240
     gtgccacctg tgaaggtcat tccttcaccg ccccctatgc ctttgcctta ttttaggcca       300
     atgggggctt ttgcacctac ccggtccggg tatattcggg ccactgtgga aagactcacc       360
     cgggaacggg aagagtcaag agctgcggca ctctctgccg aattgccatt ggagtaccca       420
     caaggtgctc ctttgaagtt gagtttggcg atgaagttcg ccatgctcaa acataccact       480
     tggaggaagt ggtatgacgt cagtgacggg cgccttttgg aagctcatcc tggcggtccc       540
     tgtcttcctc ctcctccccc aatccaaagt cctccctctt tttctgagag ggttagggga       600
     tcttgcagga agaaatcctg tgccaaggct tttgccttgg aaaccagtct gggccttaac       660
     agggcttgga taggtttggt ggacatcccc agtacttctg tgtgctgtgc ggatggaagg       720
     actaccggag ggcaaacgat tgctcaagaa gctgatcctt tacaacatag gattagtaca       780
     tcagtagccc ccggtagggc gcagtggatc tccgagcgca gacaagctct gcgaaggaga       840
     gagcaagcaa atagcttgca gggtcttgcc gctcaaacag atatgtcttt tgagcaagcc       900
     aggaatgctt atctcggtgc tgccgatatg atagagcaag gcctaccatt gcttccccct       960
     ctgcgcagcg cttatgcccc taggggttta tggagggggc cctcaaccag agccaattac      1020
     acgctagatt ttaggctcaa tggtattccg accgggacaa acacattaga aatattgtat      1080
     aatcctgtgt cggaagaaga gatggaagaa taccgcgaca ggggcatgtc ggctgtggtg      1140
     attgatgcgc ttgaaatagc cattaaccca tttggcatgc ctgggaaccc aacagatttg      1200
     actgtcgtgg cgacgtatgg gcatgagcgt gatatgacac gtgcctttat tggatctgct      1260
     tccacgttct tagggaatgg gttagctaga gccattttct tccccggctt gcaatatagc      1320
     caggaagaac caaggcgcga atctataatt cgcctatacg tcgcttctac taatgccact      1380
     gtagacactg attcagtctt ggcagccatt agtgttggca ctctgcgtca acacgttggc      1440
     ttcatgcact atcgcacagt ggctagtaca gtacaccaag cccaggtaca aggaacgacg      1500
     ctcagggcca ctatgatggg taatactgtt gtagtgtcac ctgaaggaag tttggttact      1560
     gggacccccg aagcaagagt tgaaataggg ggtggttcta gcattaggat ggtggggcct      1620
     ctgcgatggg aaagcgtaga ggaaccggga cataccttct ctatcagaag tcgttcgcga      1680
     tctgtgagga tcgatagaaa cgttgatctt cctcaacttg aggttgagcc cagactgagc      1740
     tcaaccgtga gaggattagc tggtagagga gtgatctata ttcccaagga ttgccaggca      1800
     aataggtatt tgggcaccct gaatatacgt gatatgatct cagattttaa gggtgtccag      1860
     tatgaaaaat ggataactgc aggattagtc atgcctactt ttaaaatagt cgttaggctt      1920
     cctgcaaatg cctttactgg attgacgtgg gtaatgagtt ttgatgctta taaccggata      1980
     actagtagaa tcactgctag tgctgatcct gtatataccc tgtcggtccc acattggctt      2040
     atccatcata agttaggcac gttttcatgt gaaatagact atggagag                   2088
//