ID   FJ544924; SV 1; linear; genomic RNA; STD; VRL; 2097 BP.
XX
AC   FJ544924;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate AB24a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-2097
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-2097
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; fe828cf979a75d1871da4ec65d44e679.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2097
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="AB24a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..>2097
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUY3"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR021081"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUY3"
FT                   /protein_id="ACR46368.1"
FT                   /translation="PHLGGSVEQWLAAIETDPSFRQTVKEDVQANRERPDAIRMFSWKV
FT                   GFGPIDNPNNCNWHFVLTGERLAQPTRPVKADEVVVVPQPKKVVIPSPPPPLAPYFRAV
FT                   GAFAPTRSGFIRATVERLTWEREESRAAALFAELPLEYPQGAPLKLSLAMKFAMLKHTT
FT                   WRKWYDTSDERLMEAHPGGPCLPPPPPIQKPPSFQERVRESCRIESCARAFALETSLGL
FT                   NRAWVGVVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALR
FT                   RREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTR
FT                   ANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGN
FT                   PTDLTVVATYGHERDMSRAFVGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVA
FT                   STNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTTLRATMMGNTVVVSP
FT                   EGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQL
FT                   EAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMP
FT                   TFKIIVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKKGTFSCE
FT                   IDYGE"
FT   mat_peptide     <1..717
FT                   /product="putative homing protein 2A"
FT   mat_peptide     718..1761
FT                   /product="movement protein 2B"
FT   mat_peptide     1762..>2097
FT                   /product="coat protein 2C"
XX
SQ   Sequence 2097 BP; 510 A; 505 C; 573 G; 509 T; 0 other;
     ccccatctag ggggttctgt ggaacaatgg ctggcggcca ttgaaactga tccctccttc        60
     cgccaaactg tcaaggagga tgtccaggca aaccgggagc gtccagacgc tatccggatg       120
     ttttcctgga aagtgggatt cgggcccatt gacaacccga acaattgcaa ctggcatttc       180
     gtccttacag gcgaaaggtt agcgcagccg acccggccgg ttaaagccga tgaggttgtg       240
     gtggtgccac aaccgaagaa ggtggtgatt ccatcaccac ctcctcccct ggctccctat       300
     tttagggctg ttggggcttt tgcaccaacc aggtccgggt ttattcgggc cactgtggaa       360
     agactcacct gggaacggga agagtcgaga gctgcggcac tcttcgccga actgccattg       420
     gaataccccc agggtgctcc tttgaagttg agtctggcga tgaaattcgc catgctcaaa       480
     cataccactt ggaggaagtg gtatgacacc agcgatgagc gcctcatgga ggcccatcct       540
     ggtggacctt gtcttcctcc tcctccccca atccaaaaac ctccctcttt ccaggagagg       600
     gttagggagt cttgcaggat agaatcctgc gccagggctt ttgccttgga gacctccctg       660
     ggtcttaata gggcctgggt aggtgtggta gacatcccca gcacttctgt gtgctgtgcg       720
     gatggaagaa ctaccggtgg gcaaacgatt gcccaagaag ctgatccctt acaacatagg       780
     gtcagtactt ctgttgcccc cggtagggca caatggatct ccgaacgcag acaggctctg       840
     cgaaggagag agcaagcaaa tagtttgcaa ggtcttgctg ctcaaactga catgaccttt       900
     gagcaagcca ggaacgctta tcttggtgcc gctgatatga ttgagcaagg cctaccgttg       960
     cttccccctt tgcgcagcgc ttatgcccct aggggcttgt ggaggggacc ttctaccaga      1020
     gccaattaca cgttagattt taggcttaat ggtataccga cagggacaaa cacactggaa      1080
     atattgtata atcccgtgtc ggaggaagag atggaagagt accgagatag aggtatgtcg      1140
     gctgtggtga ttgatgcgct agaaatagcc ataaatccat ttggcatgcc aggaaatcca      1200
     acggacttaa ccgtcgtagc gacatatggg catgagcgtg atatgtcacg cgcctttgtt      1260
     ggatctgctt ccacattcct agggaatggg ttagctaggg ccatattctt tcctggctta      1320
     caatatagtc aggaggaacc aaggcgtgag tccataattc gcctatatgt tgcttcaacc      1380
     aatgccacag ttgacactga ttcagtcttg gcagccatta gtgttggcac tttgcgtcag      1440
     cacgtcggct ccatgcatta tcgaactgtg gccagcactg tgcaccaggc ccaggtgcaa      1500
     gggacaactc ttcgggcaac tatgatgggt aacactgttg tagtatcacc tgaaggaagc      1560
     ctagttactg gaacccctga agcgagagtc gaaatagggg gtggttctag tattaggatg      1620
     gtgggacccc tacaatggga aagtgtggag gaaccagggc aaaccttctc tatcagaagc      1680
     cgctcacggt ctgtgaggat tgacagaaat gttgatcttc cccaacttga ggccgagccc      1740
     agattgagct cgaccgtgag gggattggct ggtaggggag tagtctacat tcccaaggat      1800
     tgccaggcaa atagatactt gggcaccctg aatatacgag atatgatttc agattttaag      1860
     ggtgtccagt atgaaaagtg gataactgca ggattagtca tgcctacttt taagattatt      1920
     gttaggctac ctgctaatgc ctttactgga ttgacgtggg tgatgagctt cgatgcttat      1980
     aaccggataa ctagtagaat caccgctagt gcggatcctg tatataccct gtcagtccct      2040
     cattggctta tccaccataa gaaaggcacg ttttcatgtg agatagacta cggtgaa         2097
//