ID   FJ544923; SV 1; linear; genomic RNA; STD; VRL; 2097 BP.
XX
AC   FJ544923;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   11-SEP-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Grapevine fanleaf virus isolate AB23a polyprotein P2 gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-2097
RX   DOI; 10.1016/j.virusres.2009.04.018.
RX   PUBMED; 19409944.
RA   Vigne E., Marmonier A., Komar V., Lemaire O., Fuchs M.;
RT   "Genetic structure and variability of virus populations in cross-protected
RT   grapevines superinfected by Grapevine fanleaf virus";
RL   Virus Res. 144(1-2):154-162(2009).
XX
RN   [2]
RP   1-2097
RA   Vigne E., Marmonier A., Lemaire O., Fuchs M.;
RT   ;
RL   Submitted (11-DEC-2008) to the INSDC.
RL   UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France
XX
DR   MD5; 899b19f57a3781ce4c14668fd69a6765.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2097
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera; cultivar Gewurztraminer"
FT                   /isolate="AB23a"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /collection_date="30-May-2006"
FT                   /note="acronym: GFLV"
FT                   /db_xref="taxon:12274"
FT   CDS             <1..>2097
FT                   /codon_start=1
FT                   /product="polyprotein P2"
FT                   /db_xref="GOA:C5HUY2"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR021081"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUY2"
FT                   /protein_id="ACR46367.1"
FT                   /translation="PHLGGSVEQWLAAIETDPSFRQTVKEDVQANRERPDAIRMFSWKV
FT                   GFGPIDNPNKCDWRFVLTGERPVQPTRPVKADEVVVVPQPKKVVIPLPPPPPTPYFRAV
FT                   GAFAPTRSGFIRTTVERLTREREESRAAALFAELPLEYPQGAPLKLSLAMKFAMLKHTT
FT                   WRKWYDTSDVALMEAHPGGPCLPPPPPIQKPPSFQERVRESCRIKSCAKVFALETSLGL
FT                   NRAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALR
FT                   RREQANSLQGLAAQTDMTFVQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTR
FT                   ANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVVDALEIAINPFGMPGN
FT                   PTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVA
FT                   STNATVDTDSVLAAISIGTLRQHVGSMHYRTVANTVHQAQVQGTTLRATMMGNTVVVSP
FT                   EGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVWIDRNVDLPQL
FT                   EAEPRLSSTVRGLAGRGVVYIPKDCQASRYLGTLNIRDMISDFKGVQYEKWITAGLVMP
FT                   TFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKKGTFSCE
FT                   IDYGE"
FT   mat_peptide     <1..717
FT                   /product="putative homing protein 2A"
FT   mat_peptide     718..1761
FT                   /product="movement protein 2B"
FT   mat_peptide     1762..>2097
FT                   /product="coat protein 2C"
XX
SQ   Sequence 2097 BP; 512 A; 502 C; 573 G; 510 T; 0 other;
     ccccatctag ggggttctgt agaacaatgg ctggcggcca ttgaaactga tccctccttc        60
     cgccaaactg tcaaggagga tgtccaggca aaccgggagc gtcctgacgc tatccggatg       120
     ttttcctgga aagtgggatt cgggcccatt gacaacccga ataaatgcga ctggcgtttt       180
     gtccttacgg gcgaaaggcc agtgcagccg acccggccgg ttaaagccga tgaggttgtg       240
     gtggtgccac aaccgaagaa ggtggtgatt ccattaccac ctcctccccc aactccctac       300
     tttagggctg ttggggcttt tgcaccaacc aggtccgggt ttattcggac cactgtggaa       360
     agactcaccc gggaacggga agagtcgaga gctgcggcac tctttgccga attgccattg       420
     gagtaccccc agggtgctcc tttgaagttg agcctggcga tgaaattcgc catgctcaaa       480
     cataccactt ggaggaagtg gtatgacacc agtgatgtgg ccctcatgga ggcccatcct       540
     ggtggacctt gtcttcctcc tcctccccca atccaaaaac ctccctcttt ccaggagagg       600
     gttagggagt cttgcaggat aaagtcctgc gccaaggttt ttgccttgga gacctccctg       660
     ggccttaata gggcctgggt aggtttagtg gacatcccca gcacttctgt gtgctgtgcg       720
     gatggaagaa ctactggtgg gcaaacgatt gcccaagaag ctgatccctt acaacatagg       780
     gtcagtactt ctgtagcccc cggtagggct cagtggatct ccgaacgcag acaggctctg       840
     cgaaggagag agcaagcgaa tagcttgcaa ggtcttgctg ctcagactga catgactttt       900
     gtgcaagcca ggaatgccta tcttggtgct gctgatatga ttgagcaagg cctaccattg       960
     cttccccctt tgcgcagcgc ttatgccccc aggggcttgt ggaggggacc ttctaccaga      1020
     gccaattaca cgttagattt taggcttaat ggtataccga caggaacaaa tacactggaa      1080
     atattgtata atcctgtgtc ggaggaagag atggaagagt accgggatag aggtatgtcg      1140
     gcagtggtgg tcgatgcgct agaaatagct ataaatccat ttggcatgcc aggaaatcca      1200
     acggacttaa ccgtcgtagc gacatatggg catgagcgtg atatgacacg cgcctttatt      1260
     gggtctgctt ccacattcct agggaatggg ttagctaggg ccatattctt cccaggctta      1320
     caatatagtc aggaggaacc aaggcgtgag tccataattc gcctgtatgt cgcttcaact      1380
     aatgccacag tagacactga ttcagtcttg gcagccatca gtattggcac tttgcgtcaa      1440
     cacgttggct ccatgcacta tcgaactgtg gctaacactg tgcaccaggc ccaggtgcaa      1500
     ggtacaacac ttagggcaac tatgatgggt aatactgttg tagtgtcgcc tgaaggaagc      1560
     ctagttactg gaacccctga agcgagagtc gaaatagggg gtggttctag tattaggatg      1620
     gtgggacctc tacaatggga aagtgtggag gaaccagggc aaaccttctc tatcagaagc      1680
     cgctcacggt ctgtgtggat tgacagaaat gttgatcttc cccaacttga ggccgagccc      1740
     agattgagct cgaccgtgag gggattggct ggtaggggag tagtctacat tcccaaggat      1800
     tgccaggcaa gtagatactt gggcacccta aatatacgag atatgatttc agattttaag      1860
     ggtgtccagt atgaaaagtg gataactgca ggattagtca tgcctacttt taagattgtt      1920
     attaggctac ctgctaacgc ctttactgga ttgacgtggg tgatgagttt cgacgcttat      1980
     aaccggataa ctagtagaat cactgctagt gcggatcctg tatacaccct gtcagttccc      2040
     cactggctta tccaccacaa gaaaggcacg ttttcatgtg agatagacta cggagaa         2097
//