ID   FJ539084; SV 1; linear; genomic RNA; STD; VRL; 1793 BP.
XX
AC   FJ539084;
XX
DT   23-JAN-2009 (Rel. 99, Created)
DT   23-JAN-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Malva vein clearing virus isolate NAKT-NL polyprotein gene, partial cds.
XX
KW   .
XX
OS   Malva vein clearing virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1793
RA   Pham K.T.K., Meekes E., de Kock M.;
RT   "Molecular identification of a potyvirus causing flower breaking in
RT   Anisodontea";
RL   Unpublished.
XX
RN   [2]
RP   1-1793
RA   Pham K.T.K., Meekes E., de Kock M.;
RT   ;
RL   Submitted (10-DEC-2008) to the INSDC.
RL   Applied Plant Research, Section Flower Bulbs and Nursery Stocks, Wageningen
RL   UR, Postbus 85, 2160 AB, Lisse, The Netherlands
XX
DR   MD5; fddc86a11cf0c949740847f8f899f87d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1793
FT                   /organism="Malva vein clearing virus"
FT                   /host="Anisodontea"
FT                   /isolate="NAKT-NL"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /collection_date="Jun-2008"
FT                   /db_xref="taxon:565624"
FT   CDS             <1..1492
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B8YJI8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B8YJI8"
FT                   /protein_id="ACL97546.1"
FT                   /translation="ILAMKYALLSEGFKEDEHDNMCRYFVNGDDLLIAIEPKYEHVLDT
FT                   FANHFGNLGLKYDFSTRTRNKSDLWFMSHMGMKRDGVFIPKLERERIVSILEWNRSKEP
FT                   VHRLEAICASMIEAWGYDDLVHEIRKFYSWVLEQAPYNALAAEGKAPYIAETALRKLYM
FT                   DIDPTESELERYVQVLNDIEVDESLSVYHQADEKLNAGVPTPSRGDRRLGKESTPSDQQ
FT                   TQDESNARESPPNTERLNTGGEQPSAQNSGAMVSRPDKDINVGTTGIVSAPRLTRMVAK
FT                   MRVPKVKGKHAMHMGHLMTYNPVQTDLSNARATQRQFEQWFEGVRNEYGVTDEQMTVIA
FT                   NGLMVWCIENGTSPNINGVWTMMDGEEQVEYPLRPVMDHAAPTFRQIMAHFSDVAEAYI
FT                   EKRNYHGNYMPRWGRQRNIRDRSLARYCFDFYEVTTSTPIRAVEAHNQMKAAALRGETN
FT                   RLFGLDGKVTTQEENTERHTAEDVNQNLHTLLGMRGVQ"
XX
SQ   Sequence 1793 BP; 576 A; 341 C; 431 G; 445 T; 0 other;
     gattttggct atgaaatacg cattgttatc cgaaggattt aaggaagacg aacatgacaa        60
     catgtgtaga tatttcgtaa atggagatga tttgctcata gcaatagaac ccaaatacga       120
     gcatgtcctt gacacatttg caaaccattt tggaaacctc ggattaaaat acgacttttc       180
     aacacgaaca agaaataaga gcgacctgtg gttcatgtcg catatgggaa tgaaaagaga       240
     tggtgtgttt ataccaaagc ttgaacgtga aagaattgtt tcaattcttg aatggaaccg       300
     ttcaaaggaa cctgtccata gactcgaagc aatctgcgcg tcgatgattg aagcttgggg       360
     ttatgatgac cttgtccacg agatacggaa attctactca tgggtcttgg aacaagcacc       420
     gtataatgct ctagcagctg agggcaaagc accatacata gctgaaacag ctctgcgaaa       480
     attgtacatg gatatcgatc ccactgaatc agagcttgag agatatgtcc aagttttaaa       540
     cgatattgaa gttgatgaga gtctctcagt ttatcaccaa gcagatgaga aattgaatgc       600
     cggtgttcca actccatcaa gaggtgatag aagattagga aaggagagca cgccatcaga       660
     ccaacaaact caagatgagt ctaacgccag ggaatcacct ccaaacactg agagactaaa       720
     tacgggagga gagcaaccaa gcgcacagaa ctcaggagca atggtcagta gaccagacaa       780
     ggatataaat gttggtacaa caggaatcgt gtccgcacca cgattaacta gaatggttgc       840
     aaagatgaga gtgcccaagg tcaaaggaaa acatgctatg cacatggggc atcttatgac       900
     ttacaaccct gttcagacgg atttgtctaa tgcacgcgca acacagaggc aatttgagca       960
     gtggtttgaa ggagtgcgga acgaatatgg tgtcacagat gaacagatga ctgtcatagc      1020
     aaatgggttg atggtttggt gtattgaaaa tggaacatca ccaaatatta atggggtttg      1080
     gactatgatg gatggtgaag agcaagtgga atacccacta cgaccagtaa tggatcatgc      1140
     agcaccaaca ttcagacaga taatggcaca ttttagtgac gttgccgaag cgtatatcga      1200
     aaagagaaat taccatggta attacatgcc acgctggggt aggcaacgga acatcagaga      1260
     ccgtagttta gcacgctatt gttttgactt ttatgaagtc acaactagta cgccaattcg      1320
     agcagtcgag gctcacaacc aaatgaaggc ggctgcgtta cgcggcgaga caaacaggtt      1380
     gttcggattg gatggaaagg tcacaacaca ggaggagaac acggagagac acacagcaga      1440
     ggatgtgaat caaaatctgc acacacttct tggcatgaga ggtgttcagt gatcgtttcg      1500
     gttttagagt aacttatata gatagtactt ataggtatgt atgtaacgag taagtacgtt      1560
     tatgttttga atgacttgcc ctatacgatt catagcgaga gcctctctcc tgagcgtatc      1620
     tggtgtgcca ttagttgcgt ttactttgcc cgtatgaggc tcccctgttg cattaaagtt      1680
     taattcgtgc taataaactt ttttgcccga atctacttgt gatgttcttt gacattaagt      1740
     gagtctcaac tcggtcaact tgcatcccag ctagcctagg acaaaaaaaa aaa             1793
//